Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0215 ATGTTCGTGAAGAAACTAGTAGAGAAAGCTTCCATCAAGAAGACTGGTGGAAATTCATCGGATGGGTTAAAGGCTAGTGATGTAGATCCACGGTTGGTATTTCATCATGGGGTGCCATCTGGGGGTGCCATGTTCGCCTATGACACCATTCAGAGGATACTGGCTCTTTCTACAAAGGGTGGACAGATTAAACTCTATGGAAAAGATAATGCTCAAGCCATGCTTGAATCTGGTGAAGCCCAGCCTAGCAAGTTTCTACAGTTCATCCAGAACCATGGTGTCCTTATAAATGTTACTTCCAATAACCATATTGAGGTTTGGGACATAGACAAGAAATCGCTGTCTGATGTGTATATTGCTAAAGAAGAAATCACTTGTTTTGCAGTCATTCAACATACCCTCTATATGTACATCGGACATTCTAATGGTGATATTTCAGTTTTGATGCTTGATCAAGAACCATCATGGCATTTAGTAAAGATGAAATACGCCATACCTCTCTCAGCTTCCTATGGTAACTCTGAAGCGTCTGATGATACTGTTGTGACGCACATACTGCCTCAACCAGCAGCTGAAAGTAAGAGGGTTCTCATAATCTTCAGAAATGGTCAAATGATATTATGGGATGTTCAGGAAAGTAGGTTTATTTTAAGAACTGGTGGAAATATGTTGCAGCTGCATAATGAAACAAAAAAAGTGACTTCGGCATGTTGGGTGTGTCCATTTGGAAGTAAAGTGGCTGTAGGGTACAACAACGGAGAGCTCTTCATTTGGAGCATCCCTTCTGTAAATATTGGAAATGCTTCAGCATCTGAATCTAGTTATCAAAACACTCCATTTCTCAAACTTAATTTAGGATATAAGTCAGACAAAATCTCCATTAGATCAATCAAATGGGTTTATGCTGGTGGAAAGGCTAGTCGACTATATGTTATGGGAGCTTCTGACTATGCAACTTCAAACTTGGTGCAGGTAGTTTTGCTGAATGATAATACAGAATCTCGCACAATTAAACTTGGACTTCATATGTCTGAATGCTGTACTGACATGGAGATCATATTATTAACTTCAACTGAGCAAAGCAAGCATAAACAAGATTCTTTCATTTTGCTTGGGAAGTCAGGCCATCTATATTTGTATGACGATAGTTTGATTGAGAAGTATCTGCTACAATGTCAATCTAAGTCCACGCCTTCACTTCCAAGGGAAGTAATTGTGAAGTTACCACTGATAGAATCAAGCATCACAACAGCAAAATTCATCTCGAACAATTCTAATGTGTTTAATTCTGAAGATGAGCTGTCCAAAAGCTATCCATTGTTTGTTCCTGTTGAAACAAATCAGAAAGATGGCATTAGCCTAAGTTCGGCCAAATTTACTGGATTTTCCAAAATTCAAAACTTATACATAACTGGACACAGCAATGGAGCCATAACCTTATGGGATGCTTCATGCCCCATCTTCACTCCGATTTTGCAATTGAAGCAACAGAGTGAAAATGACTGTTCATTAAGTGGGATACCGTTGACAGCATTATACTTTGATAGCAACACTCCACTTCTTGCTTCTGGTGACCAAAGTGGAATGATTTGCATCTTTAGATTCAAACCTGAACCATATGCCACTAACAGCTTCATGTCTCTTACTGGGGGTATAAAGAAAGGGACTGATCATATAATCCAAAGTGTGAAACATGTAAAGAGTATTGGTGCCATTATTTCAATGAACATAGACCCCAGTTCAATGCATCTTGCTGTTGGTTCTGATCAAGGACATGTTTCAGTTTTTAACATAGATGGGCCAACTTTGTTATACCAGAAACATATTTCAAGTGAAATTTCCGCTGGTATCATCTCTCTGCAGTTCTTAACCTGCAGTTTACATGGTTTCGAAAAAAACATTTTGGCCGTTGGAACAAAAGATTCATCTGTTATGACACTAGATAAAGAAAATGGAAACCCACTAGGCACAGGAACTATTTGTCCCAAGAAGCCCTCTAAAGCTCTATTTATGAACGTTTTGGATGGCCAAGGTGAACAGGTCACAGGATCAATTACAAAAGATGGATTAGACTTGAGCGAAAGGAACCATATTGATGATGCAACAACGAAACAGAAGTATATTCTACTTTGTTCTGAGAAAGCTTTGTATGTCTATTCATTGGTGCATGCGATTCAGGGAGTTAAAAAGGTGCTATACAAGAAAAAGTTCAATTCCTCTTCATGTTGCTGGGCATCAACATTTGACATCCATTCTGATGTCGGCCTTGTACTTATTTTCACTACTGGAAAAGTAGAATTAAGGTCTTTGCCAGAGTTATCCCTGGTTATGGAGACTTCAATTAGAGGTTTCAGTTACTCTCCTCCAAAATCAAAGTCATTTTCTGAGAGCCAGATATGTTCTTCATCCAAAGGAGATCTTGTTCTGGTGAATGGTGACCAGGAAATTTTTGTTGTCTCATTGTTGGTCCAAAGGAATATTTTCAGGCTTTTGGACTCTGTTAGCTGCATCTACAAGAAAGGAATGATGATTTCACAAGAAGAGCTGGTCCTCAGTCCAGTCATAAATAAGGAAAAGAAAAGGGGTATATTTAGCTCTGTCATCAAAGATTTTACTGGCAGTAAAGAAAAACATGCTCCCATCTTGGAAACTGAAGATTCTAAAGAAAGTATCCAGAAACTCTCAGCTATCTTTTCAACTGAAAATTTTCCATGCGATGCTGATAATAATGATAATCTGACTGTTGATGAAGATAACCTTGAATTAAATATAGATGACATTGACCTAGATGATCATGAAGAAAAACGCAAAGATCAAGGTATATTGGGAGGTTTTAACAAGAAGAAATTGCCTGCAAAGTTTCAGGCTCTAAAAGGAAGGCTAAAAGAGATGAAGGGCAAAATCCAGAAAGCATCGGGTAAAGAAGAACAAGATGAGCAAGCTGGTGCAGTAGATCAAATTAAGAAGAAATATGGGTTTTCCAACTCCAATGAAACAAGCGCAGCTAAATTGGCACAAAGCAAGTTGCAAGAGAACATGAAAAAGTTACAGGGAATTAACCTCCGAACAACAGAAATGCAAGATGAAGCAAAATCCTTTTCATTATTGGCAAACCATGTACTGCAGACTGCTGAACGGGAAAAAAAGAATTAA 3153 0.3841 MFVKKLVEKASIKKTGGNSSDGLKASDVDPRLVFHHGVPSGGAMFAYDTIQRILALSTKGGQIKLYGKDNAQAMLESGEAQPSKFLQFIQNHGVLINVTSNNHIEVWDIDKKSLSDVYIAKEEITCFAVIQHTLYMYIGHSNGDISVLMLDQEPSWHLVKMKYAIPLSASYGNSEASDDTVVTHILPQPAAESKRVLIIFRNGQMILWDVQESRFILRTGGNMLQLHNETKKVTSACWVCPFGSKVAVGYNNGELFIWSIPSVNIGNASASESSYQNTPFLKLNLGYKSDKISIRSIKWVYAGGKASRLYVMGASDYATSNLVQVVLLNDNTESRTIKLGLHMSECCTDMEIILLTSTEQSKHKQDSFILLGKSGHLYLYDDSLIEKYLLQCQSKSTPSLPREVIVKLPLIESSITTAKFISNNSNVFNSEDELSKSYPLFVPVETNQKDGISLSSAKFTGFSKIQNLYITGHSNGAITLWDASCPIFTPILQLKQQSENDCSLSGIPLTALYFDSNTPLLASGDQSGMICIFRFKPEPYATNSFMSLTGGIKKGTDHIIQSVKHVKSIGAIISMNIDPSSMHLAVGSDQGHVSVFNIDGPTLLYQKHISSEISAGIISLQFLTCSLHGFEKNILAVGTKDSSVMTLDKENGNPLGTGTICPKKPSKALFMNVLDGQGEQVTGSITKDGLDLSERNHIDDATTKQKYILLCSEKALYVYSLVHAIQGVKKVLYKKKFNSSSCCWASTFDIHSDVGLVLIFTTGKVELRSLPELSLVMETSIRGFSYSPPKSKSFSESQICSSSKGDLVLVNGDQEIFVVSLLVQRNIFRLLDSVSCIYKKGMMISQEELVLSPVINKEKKRGIFSSVIKDFTGSKEKHAPILETEDSKESIQKLSAIFSTENFPCDADNNDNLTVDEDNLELNIDDIDLDDHEEKRKDQGILGGFNKKKLPAKFQALKGRLKEMKGKIQKASGKEEQDEQAGAVDQIKKKYGFSNSNETSAAKLAQSKLQENMKKLQGINLRTTEMQDEAKSFSLLANHVLQTAEREKKN* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0215 1050 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1049 - -
Vra7g0215 1050 SUPERFAMILY WD40 repeat-like 52 598 IPR036322 GO:0005515
Vra7g0215 1050 Coils Coil 954 974 - -
Vra7g0215 1050 Pfam Lethal giant larvae(Lgl) like, C-terminal 709 827 IPR013905 -
Vra7g0215 1050 Gene3D - 43 317 IPR015943 GO:0005515
Vra7g0215 1050 SUPERFAMILY WD40 repeat-like 462 814 IPR036322 GO:0005515
Vra7g0215 1050 SMART WD40_4 497 534 IPR001680 GO:0005515
Vra7g0215 1050 SMART WD40_4 401 482 IPR001680 GO:0005515
Vra7g0215 1050 SMART WD40_4 556 597 IPR001680 GO:0005515
Vra7g0215 1050 SMART WD40_4 219 259 IPR001680 GO:0005515
Vra7g0215 1050 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1049 - -
Vra7g0215 1050 CDD R-SNARE_STXBP5_6 986 1038 - -
Vra7g0215 1050 Gene3D - 547 683 IPR015943 GO:0005515
Vra7g0215 1050 Gene3D - 321 546 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0215 Vra-Chr7 3219366 3229475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0215 - - gmx:100793138 1762.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0860 11 7231644 7240294 Vra7g0215 7 3219366 3229475 PCT