Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0860 ATGTTCGTGAAGAAACTCGTGGAGAAAGCATCCATAAAGAAGGCTGTTGGAAATTCAGTGGATGGGTTAAAAGCTAGTGATGTAGAACCACGTTTGGTGTTTCATCAAGGGGTACCATCCGGTGGTACCAAGTTTGCCTATGACAATATTCAGAAGATTCTTGCTCTTTCCACCAAGGATGGTCGGATTAAACTATTTGGAAAAGATAATGCCCAAGTCCTGCTTGAATCTAGAGAGCCGGTACCTAGCAAATTTTTACAGTTCATTCAGAACCAAGGCTTCCTTATAAATGTCTCTTTCAATAATCATATTGAGGTTTGGGACATAGACAAGAAACTGCTCATTGACGTGTTCATTGTTAAAGAAGAAATTACCTGTTTTTCGGTTCTTCAACATAGCTTCTTCATGTACATTGGATTTTCTAATGGTAATATTGCAGTTTTAAGTCTTGATCAACAACCATGGCATGTGGTTAGGATGAAATACTCCATACCCCTTTCAGCTTCCTATGGAAATTCAACAGAAGAATCTGATGATACTGTTGTCACACACGTACTGCCTCAACCAACAGCCGAGAGTCAGAGAGCTCTCATAATCTTTAGAAATGGGCAAATAATATTGTGGGATATTCGAGAAAGCAGGTCCATCTTTAGAACTGGGGGAAGAATGTTACAAACACGGTATAATGAAACAAAGAAAGTGTCTTCTGCATGTTGGGTATGTCCTTTCGGAAGCAAGGTGGTTGTAGGGTACAACAATGGAGAGCTCTTCATTTGGAGCATTCCTTCTCTAAACACAGGAAATAGTTTAGCAGTTGATTATAGCAGTCAAAATACTCCAATGTTCAAGTTTAACTTAGGATATAAATCAGACAAAACTTCAATCAGATCAGTCAAATGGATTTATGCAGAAGGAAGAGCTAGTCGACTATACGTTATGGGAGGTTCTGATTATGCCCCTTCAAACTTGTTGCAGGTAGTGTTGTTGAATGAGCATACAGAATCTCGCACAATTAAGATGGGGCTTCATTTGTCAGAAGGTTCTGTTGACATGCAGATCATATCAACCTCAAGCAAGCAGAGACAAAATTATTTCATTTTGCTTGGGAAATCAGGGAACGTATATCTGTATGATGATAATTTGATTGAAAGATATCTGTTGCAGAGCCAGTCTAAGTCCACTCCTTCACTGCCAAAGGAAGTGGTTGTGAAGTTACCACTGTCAGATTCAAGCATCACTACAGCAAAATTCATCTCCAACAATCCCAATGCGTTTAGTTCTGATGACGAGTATTACAGCCAGCTGGTCAAGAATTATCCACCGCTTATTCCCATTGAAACAAATCTCAAAGATGGGATTAACTTCAGTGCTGCCAATTTCACTGGATTTTCGAACTTAAGAAACTTGTACATAACTGGACACAGCAATGGAGCCATAACTTTTTGGGATGCGTCATGTCCCTTTTTCACCCCAATTTTGCAATTAAAGCAACAGGCTGAAAATGATGTTTCTTTAAGTGGTGTTCCCTTGACAGAATTATATTTTGATAGCAACTCTCCACTCCTAATTTCTGGTGATCAAAGTGGGATGGTTCGTATCTATAGATTCAAACCTGAACCATATGCATCCAACAGCTTCATGTCTCTTACTGGAAATACAAAGAAAGGGACTGATCATGTAATCCACAGTATGAAACTCGTAAAAACTAGTGGTGCTGTAATTTGCATGAACATAGATCATAACTCAAGGCACCTTGCTGTTGGTTCTGACCAAGGAAACGTTTCAGTCATTAACATAGATGAACCCTCTTTGTTATACCGGAAAAATATTTCAAGTGAAATTTCCTCCAGTATCGTCTCTTTGCAGTTTAAAACCTGCAGTTTGCGTGGTTTTGACAAAAACATTTTACTAGTTGGAACAAAGGACTCATCCGTTCTAGCACTAGATAGTGAAACTGGAAATCCATTCAACACTGAAGCTATTCACCCTAAGAAGCCCTCTAAAGCCATATATATGCAAGTGTTGGATGGAGTAGGAGAACCAATCACAGGATCGGTTACAAAAGATGGCTTAGACTCAAGAGAAGGGAATCGTACTGAAGATGCAACAGCAAAGCAATTGTACATTTTGCTGTGTTCTGAGAAGGCCTTGTATGTCTATTCTTTTGTGCATGTTGTACAGGGAGTTAAAAAGGTGCTTTACAAGAAGAAATTTCATTCCTCTTCCTGTTGCTGGGCATCAACAATTTACAACCTCTCTGATATCAGTCTTCTTCTCCTTTTCACCAGTGGGAAAGTGGAATTAAGGTCGTTGCCAGCTTTATCTCTGATAGCGGAGACTTCAATTAGAGGTTTCACTTATTCACCACCAAAATTGAAATCATATTCTGATTGCCAGATATGTTGTTCACGCAAAGGAGATCTTGTTTTGGTGAATGGTGATCAGGAAATTTTTGTTGTTTCATTGTTGGCCCAGAGGAATATTTTCAGGCTTTTGGACTCTGTTAGCTGCATCTACAGAAAGGAAATAATGCTATCAGAAGAAGAGCTTGGTCCTAGCCCTGTAATCGACAAGGGAAAGAAAAAGGGTATACTCAGCTTCGCTATAAAAGATTTTACAAGTAGTAAAGAAAAGCATGGACCCCTCATGGGTAAAGAAGATCCCAAAGAAAACATACGGGAACTCTCAGCAATATTCTCAAATGCGAACTTTGCATGTTACGATAATGATGATAAACCAACAGTGGATGAAAGTGAGCTTGAATTAAACATAGATGACATTGACTTAGAGGATCATGAAGAAAAACGCAAAGAACAAAGCATATTAGGAGCTCTTAATAAGAAGAAATTGGTTGGAAAATTTCAGTCTCTGAAAGGAAGATTGAAAGAAATGGGAAACTACCAGAAGGCATCAGATAAGGAAGGGCACCAGGAGGAAAAAGATGGTGCGCTGGATCAAATTAAGAAGAAATATGGATTTTCTTCTTCTTCCAATGAAACAAACGCTGCTAAACAGGCACAAATCAAGCTTCATGAAAATACATGGAAATTGCAGGGTACCAACCTTCGTGCCAGAGAGATGCAAGATACAGCAAAATCATTTTCATCATTGGCAAAACAAGTGCTCCGAACTGCTGAGCAGGATAGACAAAGTTGA 3156 0.391 MFVKKLVEKASIKKAVGNSVDGLKASDVEPRLVFHQGVPSGGTKFAYDNIQKILALSTKDGRIKLFGKDNAQVLLESREPVPSKFLQFIQNQGFLINVSFNNHIEVWDIDKKLLIDVFIVKEEITCFSVLQHSFFMYIGFSNGNIAVLSLDQQPWHVVRMKYSIPLSASYGNSTEESDDTVVTHVLPQPTAESQRALIIFRNGQIILWDIRESRSIFRTGGRMLQTRYNETKKVSSACWVCPFGSKVVVGYNNGELFIWSIPSLNTGNSLAVDYSSQNTPMFKFNLGYKSDKTSIRSVKWIYAEGRASRLYVMGGSDYAPSNLLQVVLLNEHTESRTIKMGLHLSEGSVDMQIISTSSKQRQNYFILLGKSGNVYLYDDNLIERYLLQSQSKSTPSLPKEVVVKLPLSDSSITTAKFISNNPNAFSSDDEYYSQLVKNYPPLIPIETNLKDGINFSAANFTGFSNLRNLYITGHSNGAITFWDASCPFFTPILQLKQQAENDVSLSGVPLTELYFDSNSPLLISGDQSGMVRIYRFKPEPYASNSFMSLTGNTKKGTDHVIHSMKLVKTSGAVICMNIDHNSRHLAVGSDQGNVSVINIDEPSLLYRKNISSEISSSIVSLQFKTCSLRGFDKNILLVGTKDSSVLALDSETGNPFNTEAIHPKKPSKAIYMQVLDGVGEPITGSVTKDGLDSREGNRTEDATAKQLYILLCSEKALYVYSFVHVVQGVKKVLYKKKFHSSSCCWASTIYNLSDISLLLLFTSGKVELRSLPALSLIAETSIRGFTYSPPKLKSYSDCQICCSRKGDLVLVNGDQEIFVVSLLAQRNIFRLLDSVSCIYRKEIMLSEEELGPSPVIDKGKKKGILSFAIKDFTSSKEKHGPLMGKEDPKENIRELSAIFSNANFACYDNDDKPTVDESELELNIDDIDLEDHEEKRKEQSILGALNKKKLVGKFQSLKGRLKEMGNYQKASDKEGHQEEKDGALDQIKKKYGFSSSSNETNAAKQAQIKLHENTWKLQGTNLRAREMQDTAKSFSSLAKQVLRTAEQDRQS* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0860 1051 MobiDBLite consensus disorder prediction 966 1005 - -
Vra11g0860 1051 SUPERFAMILY WD40 repeat-like 463 827 IPR036322 GO:0005515
Vra11g0860 1051 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1050 - -
Vra11g0860 1051 SUPERFAMILY WD40 repeat-like 45 538 IPR036322 GO:0005515
Vra11g0860 1051 Gene3D - 39 380 IPR015943 GO:0005515
Vra11g0860 1051 Pfam Lethal giant larvae(Lgl) like, C-terminal 585 828 IPR013905 -
Vra11g0860 1051 MobiDBLite consensus disorder prediction 966 987 - -
Vra11g0860 1051 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1050 - -
Vra11g0860 1051 SMART WD40_4 557 598 IPR001680 GO:0005515
Vra11g0860 1051 SMART WD40_4 220 260 IPR001680 GO:0005515
Vra11g0860 1051 SMART WD40_4 398 483 IPR001680 GO:0005515
Vra11g0860 1051 SMART WD40_4 496 535 IPR001680 GO:0005515
Vra11g0860 1051 MobiDBLite consensus disorder prediction 990 1005 - -
Vra11g0860 1051 CDD R-SNARE_STXBP5_6 986 1043 - -
Vra11g0860 1051 Gene3D - 453 677 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0860 Vra-Chr11 7231644 7240294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0860 - - gmx:100782049 1793.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0860 11 7231644 7240294 Vra11g0860 11 7231644 7240294 ECH
Vra11g0860 11 7231644 7240294 Vra7g0215 7 3219366 3229475 PCT