Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0200 ATGTCAATGATGATGGAGAAAGCAGAGTCTGGACAGAAGCTATACACGCGAATGCGGCTTTGGGAATTTCCGCATCAGTATGTGATAGAACCAACAGATGGATCTTCTTCTGGTTCTTATTTNTCAGTTAGTNNAAAAGATGGNTCCATCAAGCTCATTGATGAGATTTCTGAAAGCAGCACCGTTCGAGTTCCTAAGATTTTCACANTTTATGGGGTGGCTGGGATGTTGCGGCTTTTGGAGGTCTCTGGTTTTTCTTATTTGCCAAAGAAGACAGAGATCGATTTTTCTGGGATATTAAGAGTTGCTGAGAAGACTACGGGTCTGTTCTTCTCGTACAACGCCAATTTAACTCTCAGTACCCAAAGGCTAAATGACCTTGGTGACGAGTCTAGGTCGCTTCCCCTTTGGAGACAGGCAGAGCCTCGATTTCTATGGAATAATTATCTGTTGGAAGTGCTCATAGAGAACAAGCTTGACCCATACTTACTCCCTATCGTCCAAGGCAGTTTTCATCACTTTGAATCTGCTATCGGGAAAGATATTATTGAAATCACGTTAATCGCTAGGAGATGCACGAGAAGAAATGGAACCCGAATGTGGAGAAGAGGAGCTGATCCTGATGGATATGTGGCTAATTTTGTGGAAACAGAGCAAATTATGAAGATCAATGGGTATACAGGATCAATTGTTCAGGTTCGTGGTTCAATTCCACTGCCTTGGCAGCAAATTGTTGACTTAACATATAAACCGAAGTATGAATTACTGAACCATGAGGAAGCTCCCCGAGTTTTGGAGAGGCATTTCTTAGATTTAAGAAAAAAGTATGGGTCTGTGTTAGCTATTGACCTAGTTAACGAGCACGGAGGAGAAGGTCGGCTATGCGAAAAATATGGAAAGACAATGCAACATGTATCTGGTAACGATGTCAGATATCTGCATTTCGATTTCCATCACGTTTGCGGGCACATCCATTTTGATCGTCTTTCAATCCTTTATGATCAAATATCTGATTTTATTGAGAGAAATGGATACCTTCTATTGAATGAAAAGGGAGAGAAAATGAAGGAGCAACTTGGGGTTGTGAGAACAAATTGTATTGATTGTCTAGATCGTACAAATGTTACTCAGAGCATGATAGGCCGAAATATGCTAGAATTCCAGCTCAGAAGAATTGGGATCTTTGGTGCCGAGGAAACCATTAGTTCACATCCAAATCTAGATGACAGCTATAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTACTCAATATACAGGCACTCCTGCTCTCAAAGGAGACTTTGTCCGATTTGGGCATCGCACAATGCAGGGGATAGTAAATGATGGTGTGAATGCTCTTATGCGCTATTATTTGAATAACTTCTGTGATGGAACAAAGCAGGATGCAATTGATCTCTTACAAGGGCATTTCATAGTTTCTGCCAACCGAGAACATAGTCCTTCTCAGAATCAAGGCATTGAAGCTATTGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGACTGGCTTTTTTTTCACACTCATGTCGTTGACGCAAGGTGAATATGATTTTAAGCACTTGTTCTTCTCACTTGTGTGGGCAAGTATTAGTGTTGGTATAGCAGCATTTGTGAAGGCCAATGGTCGCGTTTTCTGCAACAGACCTCGCCTACACAAACCCCGATGTTGA 1695 0.4153 MSMMMEKAESGQKLYTRMRLWEFPHQYVIEPTDGSSSGSYXSVSXKDGSIKLIDEISESSTVRVPKIFTXYGVAGMLRLLEVSGFSYLPKKTEIDFSGILRVAEKTTGLFFSYNANLTLSTQRLNDLGDESRSLPLWRQAEPRFLWNNYLLEVLIENKLDPYLLPIVQGSFHHFESAIGKDIIEITLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMKINGYTGSIVQVRGSIPLPWQQIVDLTYKPKYELLNHEEAPRVLERHFLDLRKKYGSVLAIDLVNEHGGEGRLCEKYGKTMQHVSGNDVRYLHFDFHHVCGHIHFDRLSILYDQISDFIERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEFQLRRIGIFGAEETISSHPNLDDSYKILWANHGDDISTQYTGTPALKGDFVRFGHRTMQGIVNDGVNALMRYYLNNFCDGTKQDAIDLLQGHFIVSANREHSPSQNQGIEAIASFPLALGLVLTGFFFTLMSLTQGEYDFKHLFFSLVWASISVGIAAFVKANGRVFCNRPRLHKPRC* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0200 564 ProSiteProfiles Sac phosphatase domain profile. 100 428 IPR002013 GO:0016791
Vra7g0200 564 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 90 563 - -
Vra7g0200 564 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 13 83 - -
Vra7g0200 564 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 90 563 IPR030069 GO:0052866
Vra7g0200 564 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 13 83 IPR030069 GO:0052866
Vra7g0200 564 Pfam SacI homology domain 99 321 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0200 Vra-Chr7 3028357 3040056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0200 5 563 Acyl Lipid Metabolism Gene Families AT3G51460 67.002 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0200 K21797 - gmx:100780963 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0851 11 7168144 7183593 Vra7g0200 7 3028357 3040056 PCT