Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0851 ATGATGGAGAAGGCAGATTCTGTGCAGAAGCTGTATACGCGCATGCGGCTCTGGGCATTTCCGGATCAGTTTGTGATTGAGCCTACGGATGGATCTTCTGGTTCTTCTTTGGCTGTTAGTCGAGTCGATGGCTCCATGAAGCTCATCGATGAGGTTCCGGAATGCAGCTCGCTTCGTGTTCCTAAGATATATACAATTTTTGGTGTTGTAGGGATGTTGAGGCTATTGGCTGGATCATATTTGCTGGTTATAACCGAGCGTGAGTCTGTTGGATCTTACTTGGGGCATCCAATTTTCAAAATTTCTTCATTGAAGGTTTTCCCATGTGATAACTCTCTTAAAAACACCCCTGCTGAACAGAAGAAAATAGAGACGGAATTTTCTGCACTGCTTAATGTTGCTGAGAAGAGCTCTGGTCTGTTCTTCTCATACGAAACTAATTTAACTCTGAGTGCACAGCGATTGAATGACTTGGGTGACGAGTCTAGATTGCTTCCACTTTGGAGACAGGCAGAGCCTCGATTCTTATGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGCTTGAACCATACTTGCTCCCTGTAGTCCAAGGCAGCTTTCATCACTTTCAAGCAGCCATTGGGAAAGATATTATTGATGTCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGTTATGTTGCTAATTTTGTGGAAACAGAACAGATTATGCAGTTTAATGGGTATACTGCGTCATTTGTTCAGGTGCGTGGTTCAATCCCACTCCTCTGGCAGCAAATTGTTGATTTAACTTATAAACCAAAGTTTGAGTTGTTGAAACTTGAGGAGGCTCCACGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATACGGGGCTGTATTGGTTGTTGATCTTGTTAACACGCACGGAGGAGAAGGGCGACTATGTGAAAAATTTGGTGAAACAATGCAGCATGTGGCTAGCAATGATGTAAGATATCTGCACTTTGATTTTCACCATATATGTGGGCATGTTCATTTCGATCGTCTCTCAATCCTTTATGAACAAATTTCAGATTTTCTGGAAAGAAACGGATATCTTCTGCTGAATGAAAAGGGAGAGAAAATGAAGGAACAACTTGGAGTTATTAGGACGAATTGTATTGATTGTCTAGACCGTACAAATGTAACCCAGAGCATGATAGGTCGAAATATGTTGGAATATCAACTAAGAAGACTCGGTGTCTTTGGTGCTGAAGAAACCATTACTTCACATCCAAATCTGGATGAAAGCTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGCATTCAATACTCAGGAACTCCTGCCCTTAAAGGAGACTTTGTCAGGTTTGGGCACCGCACAGTTCAAGGGATAGTACAAGATGGTTGTAATGCTCTTCTACGATATTATTACAATAACTTTCGTGATGGAACAAAGCAGGATGCAATTGATCTCATACAAGGACATTATATAGTTTCTGTCAGCCGAGATACAGCTGCCAGTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCATTTCCCATGGCTTTTGCTCTGGTTTTGACTGGATTCCTCTTTGCAACCATGTCTTTGAGGCAAGTGCGATACGATTTTCGGCACTTCTTCTTTTCGCTAATGTGGGCGGGTATTAGTGTGGGTATAGCAGCATTTGTGAGGGCAAACGGCCGTGTTTTCTGCAACAGACCTCGCCTACACAATCCCCGGTGA 1788 0.4234 MMEKADSVQKLYTRMRLWAFPDQFVIEPTDGSSGSSLAVSRVDGSMKLIDEVPECSSLRVPKIYTIFGVVGMLRLLAGSYLLVITERESVGSYLGHPIFKISSLKVFPCDNSLKNTPAEQKKIETEFSALLNVAEKSSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLEPYLLPVVQGSFHHFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMQFNGYTASFVQVRGSIPLLWQQIVDLTYKPKFELLKLEEAPRVLERHFLDLRKKYGAVLVVDLVNTHGGEGRLCEKFGETMQHVASNDVRYLHFDFHHICGHVHFDRLSILYEQISDFLERNGYLLLNEKGEKMKEQLGVIRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETITSHPNLDESFKILWANHGDDISIQYSGTPALKGDFVRFGHRTVQGIVQDGCNALLRYYYNNFRDGTKQDAIDLIQGHYIVSVSRDTAASSQKGGLEAIASFPMAFALVLTGFLFATMSLRQVRYDFRHFFFSLMWAGISVGIAAFVRANGRVFCNRPRLHNPR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0851 595 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
Vra11g0851 595 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Vra11g0851 595 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 595 - -
Vra11g0851 595 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 595 IPR030069 GO:0052866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0851 Vra-Chr11 7168144 7183593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0851 2 595 Acyl Lipid Metabolism Gene Families AT3G51460 74.664 0.0 977
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0851 K21797 - gmx:100796999 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0851 11 7168144 7183593 Vra11g0851 11 7168144 7183593 ECH
Vra11g0851 11 7168144 7183593 Vra7g0200 7 3028357 3040056 PCT