Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0195 ATGGCCAGAAGATCACTGCCGTTCCTCAAGGACCTTCTCTCGCGCTCCTCGCCCAGCCGGATCACCACCCGATCCGTCACCTACATGCACCGCCCTGGCGACGGCACGCCGAGGCCGGTGACACTCATTCCGGGCGACGGAATTGGGCCGATGGTGACGGGCGCGGTGGAGCAGGTGATGGAGGCGATGCACGCGCCGGTTTACTTTGAGAAGTTCGAGGTCCACGGGAACATGAAGTCGGTGCCGCAGGAAGTGTTAGAGTCGATTCGGAAGAACCAGGTGTGTCTCAAGGGAGGCCTCATCACCCCCGTAGGTGGCGGCGTCAGTTCCCTCAACGTGCAACTCAGGAAGGAGCTCGATCTCTTCGCCTCCCTCGTCAACTGCTTCAACCTCCCAGGCTTGACCACGCGCCACAATAACGTCGACATCGTCGTCATCAGGGAGAACACCGAAGGCGAGTACTCCGGCCTCGAACACGAGGTCATTCCCGGCGTCGTCGAAAGCCTTAAGTTCTGTTCAGAGCGTATTGCTAAATATGCATTCGAGTATGCTTATCTGAACAACAGAAAGACGGTGACTGCTGTGCACAAAGCAAATATTATGAAGCTTGCAGATGGTTTATTTTTGGAATCTTGTCGAGAGGTTGCCACAAATTACCCTGGAATCAAGTATAATGAAATTATTGTGGATAACTGCTGCATGCAGCTTGTTTCAAAGCCTGAACAGTTTGATGTCATGGTTACCCCAAATCTTTATGGAAATTTAATTGCAAATACTGCAGCAGGCATTGCTGGAGGTACTGGAGTTATGCCAGGAGGTAATGTTGGAGCCGAGCACGCTGTGTTTGAGCAAGGTGCTTCAGCAGGAAATGTTGGTAGTGAACAAATATTAGAGCAAAAGATTGCTAATCCAGTGGCAATTCTTCTCTCGTCAGCTATGATGCTTAGGCATCTTCAGTTTCCAGCTTTTGCTGACCGTTTGGAAACTGCAGTGGCAAGTGTCATTCTGGAGGGAAAATACCGAACAGAGGATCTTGGAGGGTCAAGCACCACCCAAGAGGTTGTGGATGCAGTCATAGATGCTTTAGATTGA 1092 0.5119 MARRSLPFLKDLLSRSSPSRITTRSVTYMHRPGDGTPRPVTLIPGDGIGPMVTGAVEQVMEAMHAPVYFEKFEVHGNMKSVPQEVLESIRKNQVCLKGGLITPVGGGVSSLNVQLRKELDLFASLVNCFNLPGLTTRHNNVDIVVIRENTEGEYSGLEHEVIPGVVESLKFCSERIAKYAFEYAYLNNRKTVTAVHKANIMKLADGLFLESCREVATNYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLIANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGSEQILEQKIANPVAILLSSAMMLRHLQFPAFADRLETAVASVILEGKYRTEDLGGSSTTQEVVDAVIDALD* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0195 363 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 1 360 - -
Vra7g0195 363 Pfam Isocitrate/isopropylmalate dehydrogenase 40 358 IPR024084 -
Vra7g0195 363 PANTHER ISOCITRATE DEHYDROGENASE [NAD] REGULATORY SUBUNIT 2, MITOCHONDRIAL 1 360 - -
Vra7g0195 363 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 37 362 - -
Vra7g0195 363 Gene3D Isopropylmalate Dehydrogenase 22 362 - -
Vra7g0195 363 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 36 361 IPR004434 GO:0006099
Vra7g0195 363 SMART Iso_dh_2 39 358 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0195 Vra-Chr7 2961298 2965639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0195 K00030 - gmx:100777867 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0843 11 7035400 7038914 Vra7g0195 7 2961298 2965639 PCT