Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0150 ATGGTTGCACAAACTCTCTCTGCTTTTCTATGGCTTTCCTTCTGTGCCACACTAGTTTCTGCCAAATACATCAGGTACAATACAGGGGCTGCTATTGCTCCAGGAAAACTGAATGTTCACCTGGTTCCACACTCCCATGATGATGTTGGTTGGCTCAAAACCGTTGATCAGTACTACGTCGGATCAAACAACAGTATCCAGGTTAGAATCATAACATTCATTTGTGTTCGTTTTCAGCATTATATAATTCTCAGTTGGATGAAACAGGGGGCATGCGTTGAGAATGTGCTGGACTCGGTGGTTGTGTCACTGAAGAAAGACCCAAATAGAAAGTTTGTGTTTGCCGAAATGGCCTTTTTCCATCGGTGGTGGGTGGAACAAAGTCCAGAAACACAAGAAGAAGTGAGAAAGCTTGTGAATGCGGGGCAGCTAGAAATCATAAACGGTGGTTGGTGCATGCACGATGAAGCTGCAACGCACTACATAGACATGATTGATCAAACCACTTTGGGCCATCGATTTATCAAGGATGAGTTTAACAAGACTCCCACCGTTGGATGGCAGATTGATCCATTTGGACACTCTGCTGTGCAGGCTTACCTTCTTGGAGCTGAGCTTGGGTTTGATTCTGTACATTTTGCAAGAATTGATTATCAAGACAGAGCTAAGCGCAAAGCTGATAAGTCTCTTGAAGTTGTTTGGCGTGCCTCCAAAACATTTGGTTCTTCCGCTCAGATTTTTGCCAATGCTTTTCCTGTTCATTACAGTGCTCCAAATGGTTTCAACTTTGAAGTCAATAATGCTGATGTTAATGTTGTTCCAGTGCAGGATGATCCTCTTCTTTTTGACTACAACGTTGAACAACGTGTCAAAGACTTTATTGAAGCTGCTACTACCCAAGCAAATGTGACGAGGACAAACCATATAATGTGGACAATGGGTGATGATTTCCAGTACCAATATGCAGAGTCTTGGTTCAAGCAAATGGATAAATTAATTCACTATGTTAATAAGGATGGTAGAGTAAATGCGTTGTATTCCACTCCATCTATTTACACCAATGCCAAAAATGCTGCTAATCAAACTTGGCCACTGAAAACTGATGATTACTTCCCGTATGCTGATAGTGCTAATGCTTATTGGACTGGCTATTTCACGAGTCGCCCAGCCTTAAAGCGATATGTTAGGATGACAAGTGGATACTACTTGGCAACGCGTCAGCTTGAATTTTTTGCTGGAAAGCAATCAGCTAAATACAATACTTTTGGTCTTGGAGATGCTCTAGGAATTGCACAACACCATGATGCTGTCAGTGGCACTGCCAAACAGCACACAACCAATGACTATGCCAAACGACTGGCTATTGGAGTCTCTGAGGCTGAAGCAGTTGTTAGTTCTTCTTTGGCTTGTCTTACTAGTAAGAAATCAAGTGATCAATGTTCAGAACCTGCATCGGCTTTTGCCCAGTGTCAATTGTTAAATATCAGTTACTGCCCTCCTACAGAAGATAACATTCCAGACGCTAAGAGTTTGGTAGTCGTGGTGTATAATCCACTTGGATGGAAACGTACTGATATTGTCAAAATACCAGTTAATGATGCTAATCTTGTTGTCCAAGACTCACTGGGCAATAATATCGAAGTACAATATGTGGATGTGGATGATGTTACAACAAATTTAAGAAATTTCTATGTAAAGGCTTATTTGGGGGTGTCACCAAAACAAGCCCCAAAGTACTGGCTTCTGTTTCAGGCTTCAGTACCTCCACTTGGATGGAGCACGTACTTCATTTCTAAAGCAACGGGAACAGGGTCCGAAACAAAAAACCTATCTAACCTCGGCAGTCAGAGAGGTGACACCGTTGTCATTGGGCCTGGAAATTTAAAGATGTCCTTTTCCTCAGCCTCTGGGCAACTCAAAAGGATGTACAATTCTCGAACTGGAGTTGATATACCTATTCAGCAAAGCTATCTCTATTATGGATCTAGTGAGGGTGATAGTGATCCTCAGGCTTCTGGTGCGTATATATTCCGGCCTAATGGATCCCCTCCAACTATCATTTCAAGATCAGTGCCCACTAAGGTAATCCGCGGACCACTAGTTGATGAAGTTCATCAGAAATTTAGCTCTTGGATTTATCAGGTTACTAGGCTTTACAAAGGCAAAGACCATGCTGAAGTCGAATTCACTATTGGTCCAATTCCTACTGATGATGGAGTTGGAAAAGAGGTGATCACACGAATGACAGCAAATATGGCCACAAACAAGGAGTTTTATACTGATTCCAACGGCAGAGATTTTCTCAAACGAGTTCGAGATCATAGGGATGATTGGCCCCTTCAAGTAACTCAACCAGTTGCAGGAAACTATTACCCAATCAATCTTGGAATTTATACCAAGGATAAGAAATCTGAGTTCTCAGTCTTAGTTGATCGTGCCACTGGTGGGGCTAGCATCAAAGATGGTGAGGTGGAATTGATGCTTCATAGGCGTATTCTTCATGATGATGGTAGAGGAGTTGGGGAAGCACTCGATGAACAAGTTTGCGTGAACAATAACAAAACATGTGAAGGACTAACAGTCAGAGGAAATTATTATATCAGCATAGACAAACTTGGGGCTGGTGCACGCTGGCGCCGCACAACTGGTCAAGAAATCTATTCGCCATTCTTATTGGCTTTTACACATGAGAACTTGGAAAGTTGGAAGTCCTCACATTGGACCAAAGGAACGATCCTGGACCCAAATTACAGCTTGCCCCCGAATGTAGCTCTGATAACTCTTGAGGAGTTGGATGGTGGAGTTGTGCTTCTCCGTTTGGCACATCTATATGAGCCAAGTGAAGATGCTGAGTATTCAACTCTAACCAAAGTAGAATTGAAGAAGCTGATTGCCAAGAAAACGATAAAGGAGTTGAAGGAGGTGAGTTTATCAGCTAACCAAGAGAAGTCAGAAATAAAGAAAATGACATGGAAGGTTGAAGGAGACAATGGACAAGAAGCTCAAGGTCTTAGGGGTGGCCCTGTCAGCAGTCCTAATTTGGTTGTTGAGCTTGGCCCCATGGAAATACGAACTTTCCTTTTGAAACTTTAA 3093 0.4248 MVAQTLSAFLWLSFCATLVSAKYIRYNTGAAIAPGKLNVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVRIITFICVRFQHYIILSWMKQGACVENVLDSVVVSLKKDPNRKFVFAEMAFFHRWWVEQSPETQEEVRKLVNAGQLEIINGGWCMHDEAATHYIDMIDQTTLGHRFIKDEFNKTPTVGWQIDPFGHSAVQAYLLGAELGFDSVHFARIDYQDRAKRKADKSLEVVWRASKTFGSSAQIFANAFPVHYSAPNGFNFEVNNADVNVVPVQDDPLLFDYNVEQRVKDFIEAATTQANVTRTNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKDGRVNALYSTPSIYTNAKNAANQTWPLKTDDYFPYADSANAYWTGYFTSRPALKRYVRMTSGYYLATRQLEFFAGKQSAKYNTFGLGDALGIAQHHDAVSGTAKQHTTNDYAKRLAIGVSEAEAVVSSSLACLTSKKSSDQCSEPASAFAQCQLLNISYCPPTEDNIPDAKSLVVVVYNPLGWKRTDIVKIPVNDANLVVQDSLGNNIEVQYVDVDDVTTNLRNFYVKAYLGVSPKQAPKYWLLFQASVPPLGWSTYFISKATGTGSETKNLSNLGSQRGDTVVIGPGNLKMSFSSASGQLKRMYNSRTGVDIPIQQSYLYYGSSEGDSDPQASGAYIFRPNGSPPTIISRSVPTKVIRGPLVDEVHQKFSSWIYQVTRLYKGKDHAEVEFTIGPIPTDDGVGKEVITRMTANMATNKEFYTDSNGRDFLKRVRDHRDDWPLQVTQPVAGNYYPINLGIYTKDKKSEFSVLVDRATGGASIKDGEVELMLHRRILHDDGRGVGEALDEQVCVNNNKTCEGLTVRGNYYISIDKLGAGARWRRTTGQEIYSPFLLAFTHENLESWKSSHWTKGTILDPNYSLPPNVALITLEELDGGVVLLRLAHLYEPSEDAEYSTLTKVELKKLIAKKTIKELKEVSLSANQEKSEIKKMTWKVEGDNGQEAQGLRGGPVSSPNLVVELGPMEIRTFLLKL* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0150 1030 SUPERFAMILY Galactose mutarotase-like 486 1029 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vra7g0150 1030 Gene3D Glycoside hydrolase family 38, central domain 343 422 IPR037094 GO:0004559|GO:0006013
Vra7g0150 1030 PANTHER ALPHA-MANNOSIDASE 11 1029 - -
Vra7g0150 1030 Pfam Glycosyl hydrolases family 38 C-terminal domain 624 838 IPR011682 GO:0004559|GO:0006013
Vra7g0150 1030 Gene3D - 911 1030 - -
Vra7g0150 1030 Pfam Alpha mannosidase middle domain 379 471 IPR015341 GO:0004559|GO:0006013
Vra7g0150 1030 Pfam Glycosyl hydrolases family 38 N-terminal domain 38 374 IPR000602 GO:0004559|GO:0006013
Vra7g0150 1030 Gene3D Glycoside hydrolase family 38, central domain 423 477 IPR037094 GO:0004559|GO:0006013
Vra7g0150 1030 SUPERFAMILY Glycoside hydrolase/deacetylase 26 375 IPR011330 GO:0005975
Vra7g0150 1030 Gene3D Glycoside hydrolase 38, N terminal domain 37 342 IPR027291 -
Vra7g0150 1030 CDD GH38N_AMII_LAM_like 37 338 - -
Vra7g0150 1030 Gene3D - 620 888 - -
Vra7g0150 1030 SMART Alpha_mann_mid_2 379 453 IPR015341 GO:0004559|GO:0006013
Vra7g0150 1030 SUPERFAMILY Families 57/38 glycoside transferase middle domain 379 477 IPR028995 -
Vra7g0150 1030 Gene3D - 500 616 IPR013780 -
Vra7g0150 1030 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 922 1027 IPR041147 -
Vra7g0150 1030 PANTHER ALPHA-MANNOSIDASE 11 1029 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0150 Vra-Chr7 2481779 2490464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0150 1 977 Glycoside Hydrolase AT3G26720 59.165 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0150 K01191 - gmx:100775419 1842.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0790 11 6503871 6511842 Vra7g0150 7 2481779 2490464 PCT