Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0048 ATGGCCATTGAAATGAAAAAGAAGACTTCAAGAGCAGCAGCAACCGCAATATGGCTGGTGTCGTGGAGCATTATCATGACCTACAATGTGAGTTATGCAGAAAGAGTTTTGAAAAACCAAACCCACGAGAGTTTTTCTGCAAAAGAAAGACATGGAGCTTTGAATAGTATAATTGATTTCTTTTGGAACGATGGAGGAGATTCTTCCAATGACCGTGTTTGGCCTGAGATGAAGTTTGGTTGGAGAATTGTGGTAGGGTCAATCGTTGGATTCTTTGGAGCTGCGTTGGGAAGCGTAGGCGGGGTTGGAGGTGGAGGAATTTTCATCCCAATGCTCACTTTGATCATTGGTTTCGACGCTAAGTCTTCCACTGCCATTTCTAAGTGTATGATTATGGGAGCAGCGGTATCAACTGTATATTATAACCTGAGGTTTAGACACCCAACACTAGATTTGCCAGTTATAGATTATGATCTGGCTTTGCTATTCCAGCCTATGCTAATGCTAGGAATAAGCATTGGTGTTGCATTTAATGTCATGTTTGCTGATTGGATGGTGACGGTTTTGCTTATCATCTTATTTATTGCTACCTCCACAAAAGCTTTGTTCAAAGGCATAGATACATGGAAAAAGGAAACAACTATGAAAAAGGAGGCAGCTAAGATGTTGGAATCAGATTCTTTTCCTGGTTATGATTCTGATGAAGAAGACTATAAGCCACTACCAGCTGGTTTGACTGATCCACGAGATGAGAAGGTCCCTTTACTAAAGAACATCTACTGGAAAGAATTATTAGTCCTTGTCTACGTCTGGGTGGCTTTTCTCATCGTTCAGATCATTAAGACATACAGCAAAACTTGCTCCACACTGTACTGGATTCTTAATTTACTGCAGGTGCCTATTGCAGTCTCTGTTACGCTTTATGAAGCCATATGCTTGTGCAATGGAAGTAGAGTGATTGCATCAAAGGAAAAGGAAATAACAGATTGGAAGAAGCTTCACAAGATCTGCCTTTACTGTTGCTGTGGTATAATAGCTGGTATAGTTAGTGGACTGCTTGGTCTTGGAGGTGGCTTCATTTTGGGACCACTCTTTCTGGAGTTGGGAATTCCTCCTCAGGTTGCCAGTGCTACATCAACTTTTGCTATGGTTTTCTCTTCCTCCATGTCAGTCGTACAATACTATCTTCTAGAACGCTTCCCAGTTCCCTATGCTTCTTACTTTATTTTGATTGCAACCATAGCTGCGTTAACTGGGCAGCATGTGGTGAGAAAGATAATAGCTATCTTGGGACGAGCATCCATCATCATCTTTGTTCTAGCTTTCACCATTTTTTTGAGTGCAATCAGTTTAGGTGGAGTGGGAATTGGAAACATGGTTGAGAAGATGGAAAATAACGAGCATATGGGATTTCGAAATATCTGCCATCAATCTTAG 1437 0.412 MAIEMKKKTSRAAATAIWLVSWSIIMTYNVSYAERVLKNQTHESFSAKERHGALNSIIDFFWNDGGDSSNDRVWPEMKFGWRIVVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNLRFRHPTLDLPVIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIATSTKALFKGIDTWKKETTMKKEAAKMLESDSFPGYDSDEEDYKPLPAGLTDPRDEKVPLLKNIYWKELLVLVYVWVAFLIVQIIKTYSKTCSTLYWILNLLQVPIAVSVTLYEAICLCNGSRVIASKEKEITDWKKLHKICLYCCCGIIAGIVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYLLERFPVPYASYFILIATIAALTGQHVVRKIIAILGRASIIIFVLAFTIFLSAISLGGVGIGNMVEKMENNEHMGFRNICHQS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0048 478 PANTHER PROTEIN, PUTATIVE-RELATED 15 476 - -
Vra7g0048 478 PANTHER CEREBLON 15 476 - -
Vra7g0048 478 Pfam Sulfite exporter TauE/SafE 341 446 IPR002781 GO:0016021
Vra7g0048 478 Pfam Sulfite exporter TauE/SafE 85 198 IPR002781 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0048 Vra-Chr7 1129582 1133615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0048 - - gmx:100816633 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0681 11 5466403 5470127 Vra7g0048 7 1129582 1133615 PCT