Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0681 ATGGCTACATTAGTGAAACGCAAGACTTGTTCAATTGTTGCAGCAACATGGCTCGTCTTATGTATTCTTACTATGATCTGCAGTGTCAGTTTAGCAGACAGAATGTTGAAAGAAAAAGAAATGGGAAATGATGGTAAGAAAGAGAGACAAGGAGTGCTGAAAGCCATTGCAAATTTCTTGTGGGAGGAGGGAAAGTCTTCCTATGAACCTGTTTGGCCGAACATGAAGTTTGGTTGGAGAATTATAGTAGGATCCATCATTGGATTTTCTGGAGCTGCATTGGGAAGCGTTGGAGGCGTAGGAGGTGGAGGAATTTTTGTTCCTATGCTTGCTTTGATCATTGGCTTTGATCCCAAGTCTTCAACGGCCATTTCTAAGTGTATGATAATGGGTGCATCAATATCAACTGTGTACTATAATCTGAGGCTCAGACACCCAACACTGGACATGCCGCTTATAGACTATGACCTGGCTTTGATTTTCCAGCCTATGCTCATGTTAGGAATAAGCATTGGCGTTATATGTAATGTCATGTTTGCTGATTGGATGGTGACAGTTTTGCTTATCATCTTATTCGTAGCCACATCAACAAAAGCTACATACAAAGGCATAGACACATGGAAAAAAGAAACAATTGCAAAGAAGGAAGCATCCAAACTGCTGCAGGCAGAACCAGAACCTGGTGATGACTACAAGTCAATACCAAGTGGTCCAACTGATTCACTATTTGAGGAGGCCCCTCTACTAAAAAACATATATTGGAAAGAACTATCACTCCTCGTGTATGTCTGGGTGGCCTTTTTCATTGTTCAGATTGTTAAGGAATACAGCAAGCCCTGCTCCATCCAGTTCTGGGTTGTTAATTTCTTGCAGGTTCCTATTGCAATCTCTGTTACACTTTTTGAAGCCATAGGCTTGTACAAAGGAACGAGAGTGATTGCATCAAAGGGAAAGGAAATAACCCATTGGAAGATTCATCAGATCTGTCTCTACTGTTCCACTGGAATAATGGCTGGTATGGTTGGTGGACTGCTTGGTCTAGGAGGCGGGTTCATTTTGGGACCATTGTTTCTAGAATTGGGAATTCCTCCTCAGGTAGCAAGTGCTACATCAACTTTTTCTATGGTTTTTTCATCCTCCATGTCAGTGGTGCAATACTACTTGTTGGATCGTTTCCCAGTACCGTATGCTTCCTACTTTGCTCTGGTTGCAACCTTAGCTGCCTTCGCTGGTCAGCATGTGGTGAGAAAGATAATTGTAGTTCTTGGGCGAGCATCCATTATCATCTTCATACTAGCATTGACCATTTTCATCAGCGCACTGAGTTTAGGTGGAGTGGGAATAGAGAACATAATTGAGAAGATAGAAAAACATGAGTATATGGGGTTTGAAGATCTCTGTGCGTCTTATTAG 1413 0.4197 MATLVKRKTCSIVAATWLVLCILTMICSVSLADRMLKEKEMGNDGKKERQGVLKAIANFLWEEGKSSYEPVWPNMKFGWRIIVGSIIGFSGAALGSVGGVGGGGIFVPMLALIIGFDPKSSTAISKCMIMGASISTVYYNLRLRHPTLDMPLIDYDLALIFQPMLMLGISIGVICNVMFADWMVTVLLIILFVATSTKATYKGIDTWKKETIAKKEASKLLQAEPEPGDDYKSIPSGPTDSLFEEAPLLKNIYWKELSLLVYVWVAFFIVQIVKEYSKPCSIQFWVVNFLQVPIAISVTLFEAIGLYKGTRVIASKGKEITHWKIHQICLYCSTGIMAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFSMVFSSSMSVVQYYLLDRFPVPYASYFALVATLAAFAGQHVVRKIIVVLGRASIIIFILALTIFISALSLGGVGIENIIEKIEKHEYMGFEDLCASY* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0681 470 PANTHER PROTEIN, PUTATIVE-RELATED 14 467 - -
Vra11g0681 470 Pfam Sulfite exporter TauE/SafE 40 196 IPR002781 GO:0016021
Vra11g0681 470 Pfam Sulfite exporter TauE/SafE 334 438 IPR002781 GO:0016021
Vra11g0681 470 PANTHER CEREBLON 14 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0681 Vra-Chr11 5466403 5470127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0681 - - gmx:100801441 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0681 11 5466403 5470127 Vra11g0681 11 5466403 5470127 ECH
Vra11g0681 11 5466403 5470127 Vra7g0048 7 1129582 1133615 PCT