Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0042 ATGGCAGCTTCCACTTCCAATGCCGTTCTTCTCGGAGATGTCTACTTTGAAGAAGTCACCGCCAAGCCCTCCGGCGTTCGCTTCCGGGACAGGACGCGCCGCGCCGCTTTGCGAGCTACCGTCAATCTCACAAGATTGCAACCGTTGAACAGTCTTTTGAACTTCGGGTGCTCCACCTCCAATTCAACATGGAGGAGTTCGAATCCGAGCTCGCTCCTTGTTGGAACCAAGCGCTCCTCCTTTCCTTGCTGCTCCGCCGATACAACGCCTCATGTTCAGCACCTTTCCTCCTCCACATTTTCACTCGACCAAACAAATTTTGGTCCTGAGAAGTTGAAGTTGTTTTCGGGGTCATGTTACCTACCACATCCGGATAAGGAGGACTATGGTGGAGAGGATGCACATTTTATTTGCGTAGATGAACAAACAATCGGTGTTGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCTGGACTGTTTGCTCAAGAACTCATGTCCCATTCTGTTAGAGCAGTTGAAGAGGAACCAAAAGGTTCTGTTGATCCCGCAAGTGTTTTAGAGAAGGCTCACTCATTTACAAAGGCCAAGGGTTCATCAACAGCTTGTATCATTGCCCTTACTGATACGGGACTGCATGCCATTAATTTAGGTGACAGTGGGTTCATTGTGATTAGAGATGGATGCACCATCTTCAGGTCCCCTGTTCAACAGCATGATTTCAATTTTACGTATCAACTGGAGAGTGGCAATGGATGTGATCTACCCAGCTCTGGTGAGGTATTCAAAATATCTGTTGTGCCAGGAGATGTTGTCGTTGCTGGAACAGATGGATTGTTTGACAATCTGTACAATGATGAGGTTGCTGAAGTTGTTTTGAAGGCAGTCAGAGCTGGACTAGAACCCCAAGTAACTGCGCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCACTGGACAGGAATAGACAGACACCATTTGCTACTGCTGCCCAAGAGGCTGGGTTCCATTATTATGGTGGGAAGCTTGATGACATAACAGTTATAGTGTCATACATAACTGGCTCAACATATTGA 1080 0.4769 MAASTSNAVLLGDVYFEEVTAKPSGVRFRDRTRRAALRATVNLTRLQPLNSLLNFGCSTSNSTWRSSNPSSLLVGTKRSSFPCCSADTTPHVQHLSSSTFSLDQTNFGPEKLKLFSGSCYLPHPDKEDYGGEDAHFICVDEQTIGVADGVGGWADVGVNAGLFAQELMSHSVRAVEEEPKGSVDPASVLEKAHSFTKAKGSSTACIIALTDTGLHAINLGDSGFIVIRDGCTIFRSPVQQHDFNFTYQLESGNGCDLPSSGEVFKISVVPGDVVVAGTDGLFDNLYNDEVAEVVLKAVRAGLEPQVTAQKIAALARQRALDRNRQTPFATAAQEAGFHYYGGKLDDITVIVSYITGSTY* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0042 359 SUPERFAMILY PP2C-like 119 352 IPR036457 -
Vra7g0042 359 Gene3D - 257 358 IPR036457 -
Vra7g0042 359 PANTHER PROTEIN PHOSPHATASE 1 358 - -
Vra7g0042 359 SMART PP2C_SIG_2 128 354 IPR001932 -
Vra7g0042 359 Gene3D - 126 251 IPR036457 -
Vra7g0042 359 Pfam Stage II sporulation protein E (SpoIIE) 143 352 IPR001932 -
Vra7g0042 359 PANTHER PROTEIN PHOSPHATASE 2C 1 358 IPR039123 -
Vra7g0042 359 ProSiteProfiles PPM-type phosphatase domain profile. 118 354 IPR001932 -
Vra7g0042 359 SMART PP2C_4 105 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0042 Vra-Chr7 1056776 1066939 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0042 K17508 - gmx:100784475 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0666 11 5328467 5331975 Vra7g0042 7 1056776 1066939 PCT