Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0666 ATGATACCTGGCATTTTCTCAAGGCCGAATGCTACCATTTATTGTCGCGTTAGGGAAGCATTGACTCGGCGACAAGGGGTACCGGCATCCTTGTATAGAAGTTCAGGCTTGTCTCTTTGTTCACTGTATTCAACTTTCTTTTTGTCCGGTTCAACTCATTGCTCCTCAAGCCGCACACTTATCACAAAATCAATGACTACTGCCTTCCATTGCAATGCTCTGCTGGGAGGTGTTTATGTTAACGGTTTAATCTCAGGTTGTGATAGTGTGCTAGACTTCACAAAGCCTGCTCTTGTGTACTTAAAAGACAAAACTTTTAAAGGCTGCCTAAGGGGTAGCGGAAATCTAAGGAGACCACAAACTTCGTTTGGTTCTTTGAGTTTTGGTAGTTCTACTTTTGATGGTAATTGGAGGATCCGGGATTCCAGTTTGCTTCATGGATCATGGCTCAAGAGTTTCTCTACCTCTTCTTCTGCCTGCCCATCAGCTGGGGCTGCTCGTGCTGTCTCTTTTGATGGCAGCCCTCCCGATGAACAGCTTGCAAATTCCTCTTTTTCACCTGACAAAACTACTGTTGGTGGCAAGACCTTGAAGATGTTGTCAGGATCATGTTATCTACCGCATCCAGATAAGGAAGAGACAGGAGGAGAGGATGCTCATTTTATTTGCGCAGATGAACATGCAATTGGTGTTGCTGATGGTGTAGGTGGCTGGGCTGACGTTGGTGTTAATTCAGGACTGTTTTCCCGGGAACTTATATCCAATTCAGTGAGAGCAATTCAAGAGGAGCCTCAAGGTTCTTTTAATCCAACAAGGGTGTTAGAGAAGGCTCATTCAAATACAAAGGCTAAGGGTTCATCAACAGCTTGTATTGTTGCCCTTACTGATAAGGGACTACATGCTATTAATTTGGGCGACAGTGGATTTATTGTGGTTAGAGATGGATGCACTATTTTCCAGTCCCCTGTTCAACAACATGACTTCAATTTCACATATCAGTTGGAGAGTGGCAATGGAGGTGATCTACCCAGCTCTGCGGAGGTTTTTACGATACCCGTTGCTTCTGGAGATGTAGTCATTGCTGGAACAGATGGCTTATTTGACAATCTGTACAATAGTGAGATCACTGCAGTTGTTGTACATGCAATTAGGGCTGGACTAGAGCCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCGCTGGACCCGAGCAGGCCGACACCATTTTCTACTGCTGCTCAGGAGGCTGGCTTCCGTTATTATGGTGGCAAACTTGATGACATAACTGTTGTTGTCTCATACATATCTGGCTCACTCAGCGAGTGA 1338 0.4537 MIPGIFSRPNATIYCRVREALTRRQGVPASLYRSSGLSLCSLYSTFFLSGSTHCSSSRTLITKSMTTAFHCNALLGGVYVNGLISGCDSVLDFTKPALVYLKDKTFKGCLRGSGNLRRPQTSFGSLSFGSSTFDGNWRIRDSSLLHGSWLKSFSTSSSACPSAGAARAVSFDGSPPDEQLANSSFSPDKTTVGGKTLKMLSGSCYLPHPDKEETGGEDAHFICADEHAIGVADGVGGWADVGVNSGLFSRELISNSVRAIQEEPQGSFNPTRVLEKAHSNTKAKGSSTACIVALTDKGLHAINLGDSGFIVVRDGCTIFQSPVQQHDFNFTYQLESGNGGDLPSSAEVFTIPVASGDVVIAGTDGLFDNLYNSEITAVVVHAIRAGLEPQVTAQKIAALARQRALDPSRPTPFSTAAQEAGFRYYGGKLDDITVVVSYISGSLSE* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0666 445 SUPERFAMILY PP2C-like 203 437 IPR036457 -
Vra11g0666 445 PANTHER PROTEIN PHOSPHATASE 49 444 - -
Vra11g0666 445 Gene3D - 209 335 IPR036457 -
Vra11g0666 445 SMART PP2C_4 190 437 IPR001932 -
Vra11g0666 445 Pfam Stage II sporulation protein E (SpoIIE) 227 437 IPR001932 -
Vra11g0666 445 PANTHER PROTEIN PHOSPHATASE 2C 49 444 IPR039123 -
Vra11g0666 445 ProSiteProfiles PPM-type phosphatase domain profile. 200 439 IPR001932 -
Vra11g0666 445 SMART PP2C_SIG_2 212 439 IPR001932 -
Vra11g0666 445 Gene3D - 336 444 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0666 Vra-Chr11 5328467 5331975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0666 K17508 - gmx:100785804 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0666 11 5328467 5331975 Vra11g0666 11 5328467 5331975 ECH
Vra11g0666 11 5328467 5331975 Vra7g0042 7 1056776 1066939 PCT