Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1750 ATGGCCGATTCAACCTCAAGCGATTCTCTCTCGCTAGACATCGATTCCTTCTCTCCTTCACCTCAGGAACATATCATCAGAACACGCCATGGTTCTATATCCGTTTCTGTATACGGAGACCAGGATAAGCCAGCACTTATCACATATCCAGATTTGGCTTTAAATTATGTCTCCTGCTTTCAGGGGTTATTATTTTGTCCCGAGGCATATTACCTTCTGCTCCACAATTTCTGCATTTATCACATTAGTCCACCTGGGCATGAGTTAGGAGCTGTTCCAATTGATCCAGATTATCCAATTCTTTCTGTAGATGACTTAGCTGATCAAATAGCTGAGGTTCTCAACTTTTTCGGTCTTAGCGCAGTCATGTGTATGGGAGTAACTGCTGGGGCTTACGTTCTTACCTTATTTGCTATGAAGTATAGACAACGTGTTCTTGGTTTGATACTCGTTTCACCTCTATGTAAAGAACCATCTTGGGCTGAATGGTTGTACAACAAGGTCATGTCAAATTTGCTATACTTCTATGGCATGTGTGGCGTAGTAAAGGAAATATTGCTGAAGCGGTACTTCAGCAAGGAAATTCGAGGTGGTACACAATTGCCGGAGTCGGATATTGTTAAAGCGTGCCGAAGGTTGTTGGATGAGAGGCAGAGTTTGAATGTGTGGCGATTCCTGGAGGCTATTAACGGGAGACCTGACATAAGTGAAGGGTTGAGAAAATTACAGTGCCGTTCACTTATTTTTGTTGGGGATATGTCACCATTTCACTCGGAGGCTCTCCACATGACTTCGAAATTGGACAGACGATTCAGTGCCTTAGTTGAGGTTCAAGCATGTGGATCAATGGTAACAGAGGAGCAGCCTCATGCGATGTTAATACCGATGGAGTACTTTCTGATGGGATATGGCTTGTACAAGCCATCCAAGCTAAGTGTCAGCCCAAGAAGCCCCTTGAGTCCATCTTGCATATCTCCCGAGCTTTACTCCCCAGAGAGTATGGGTTTAAAATTGAAACCCATAAAGACACGAATTTCTATGGAAATCTAG 1050 0.4362 MADSTSSDSLSLDIDSFSPSPQEHIIRTRHGSISVSVYGDQDKPALITYPDLALNYVSCFQGLLFCPEAYYLLLHNFCIYHISPPGHELGAVPIDPDYPILSVDDLADQIAEVLNFFGLSAVMCMGVTAGAYVLTLFAMKYRQRVLGLILVSPLCKEPSWAEWLYNKVMSNLLYFYGMCGVVKEILLKRYFSKEIRGGTQLPESDIVKACRRLLDERQSLNVWRFLEAINGRPDISEGLRKLQCRSLIFVGDMSPFHSEALHMTSKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYKPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISMEI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1750 349 SUPERFAMILY alpha/beta-Hydrolases 22 299 IPR029058 -
Vra6g1750 349 PANTHER N-MYC DOWNSTREAM REGULATED 5 349 IPR004142 -
Vra6g1750 349 Gene3D alpha/beta hydrolase 18 302 IPR029058 -
Vra6g1750 349 Pfam Ndr family 23 306 IPR004142 -
Vra6g1750 349 PANTHER PROTEIN NDL2 5 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1750 Vra-Chr6 33723225 33727816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1750 - - gmx:100815084 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1750 6 33723225 33727816 Vra5g1401 5 20734925 20739618 PCT