Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1401 ATGGAGTGTGAGTGGTTACACATTCACGACGCTATTGAGAGTGAAATGGCAGATTCGGTGTCGGTGGACATGGAAGCCATTTCTCTTCCACCCGAGGAACATGTTGTAAGAACTCGCTCTGGTTGCGTCTCTGTTGCTGTGTATGGGGACCAGGACAAACCAGCGCTGATCACGTATCCTGATTTAGCTTTAAATTATGTTTCCTGCTTTCAAGGGTTGTTATTTTGTCCAGAAGCCTGTTCGTTACTGCTTCACAATTTCTGCATCTATCATATTAGTCCACCTGGGCATGAGTTGGGAGCTGCTGCCATTGATCCAGACGGTCCAATTCTTTCTGCTGACGACTTAGCTGATCAAATAGCCGAAGTTCTTAATTATTTTGGTCAGAGTGCAGTGATGTGTATGGGAGTAACTGCTGGGGCTTACATTCTTGCCTTATTTGCTGTGAAATATAGACATCGTGTTCTTGGTTTGATACTTGTTTCCCCATTATGTAAAGCACCATCTTGGACTGAATGGCTGTACAATAAGGTCATGTCAAATTTACTCTACTTTTACGGCATGTGTGGGGTGGTTAAAGAAATATTGCTAAACCGATACTTTAGCAAGGAAGTTCGAGGCAGTGACTATTTGCCAGTGTCTGATATTGTTCAAGCATGCCAAAGGTCATTGGATGAGAGGCAGAGTTTGAATGTGTGGCGGTTCCTTGAAGCGATTAATGGGAGACATGACATCAGTGAAGGATTGAGAAAATTACATTGTCGTTCACTAATTTTTGTTGGGGATATGTCTCCTTTTCACTCTGAGGCTCTCCACATGGTATCTAAGTTGGATAGACGATTCAGTGCCTTAGTTGAAGTTCAAGCGTGTGGGTCAATGGTAACAGAGGAGCAACCTCATGCCATGTTAACACCGTTGGAGTACTTTCTCATGGGATATGGCTTGTACAGACCATCTAAGTTGAGTGTCAGCCCAAGAAGTCCCTTGAGTCCCTCTTGCATTTCTCCTGAGCTTTATTCCCCGGAGAGCATGGGTTTGAAATTGAAACCAATCAAGACACGAATTTCAGTGGAGATGTAG 1080 0.438 MECEWLHIHDAIESEMADSVSVDMEAISLPPEEHVVRTRSGCVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFCPEACSLLLHNFCIYHISPPGHELGAAAIDPDGPILSADDLADQIAEVLNYFGQSAVMCMGVTAGAYILALFAVKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYFYGMCGVVKEILLNRYFSKEVRGSDYLPVSDIVQACQRSLDERQSLNVWRFLEAINGRHDISEGLRKLHCRSLIFVGDMSPFHSEALHMVSKLDRRFSALVEVQACGSMVTEEQPHAMLTPLEYFLMGYGLYRPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISVEM* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1401 359 PANTHER N-MYC DOWNSTREAM REGULATED 16 358 IPR004142 -
Vra5g1401 359 Pfam Ndr family 33 317 IPR004142 -
Vra5g1401 359 Gene3D alpha/beta hydrolase 27 312 IPR029058 -
Vra5g1401 359 PANTHER PROTEIN NDL2 16 358 - -
Vra5g1401 359 SUPERFAMILY alpha/beta-Hydrolases 43 310 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1401 Vra-Chr5 20734925 20739618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1401 - - var:108331933 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1750 6 33723225 33727816 Vra5g1401 5 20734925 20739618 PCT