Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1748 ATGCATGAAACATCAAAAGTTCACAGCAACACACGAAAAAAACATCATATGGCTTCAACCCAGCACCATGTCCAAGGCCTAACAGCTGAGGAAGAAACGGAACTAGAACCTGTGATAAAAAAATACCATCTTTTCGAACACTGTCCCAACAAATGTTCTTCCATAATATCCTACCGCATCGATGCTCCGGCGAGCACGGTTTGGCCGTTCGTGCGAAGCTTCGAGAACCCTCAGAAGTACAAGCACTTCATCAAAGGGTGCAACATGAGAGGTGACGGTGGCGTCGGAAGCATAAGAGAAGTAACCGTTGTTTCTGGTCTTCCGGCGTCGACGAGCACCGAGAGACTCGAGATTTTGGACGATGAAAAACACGTGCTGAGCTTTAGGGTGGTTGGTGGCGAGCACCGACTCAAGAACTACCGTTCCGTTACGTCGGTCAACGAGTTCAGGAAAGAGGGTAGGGTTTACACCATCGTATTGGAATCGTATATCGTAGACATACCCGAAGGGAATACGGAGGAAGATACGAAGATGTTTGTGGACACTGTGGTCAAACTCAACCTTCAGAAACTTGGGGTGGTGGCCATGGCTTCTTCTTCATCCATGCATGAACAATAA 618 0.4773 MHETSKVHSNTRKKHHMASTQHHVQGLTAEEETELEPVIKKYHLFEHCPNKCSSIISYRIDAPASTVWPFVRSFENPQKYKHFIKGCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDEKHVLSFRVVGGEHRLKNYRSVTSVNEFRKEGRVYTIVLESYIVDIPEGNTEEDTKMFVDTVVKLNLQKLGVVAMASSSSMHEQ* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1748 205 MobiDBLite consensus disorder prediction 1 31 - -
Vra6g1748 205 Gene3D - 11 205 IPR023393 -
Vra6g1748 205 CDD PYR_PYL_RCAR_like 52 191 - -
Vra6g1748 205 SUPERFAMILY Bet v1-like 52 192 - -
Vra6g1748 205 PANTHER - 29 200 - -
Vra6g1748 205 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 29 200 - -
Vra6g1748 205 Pfam Polyketide cyclase / dehydrase and lipid transport 59 191 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1748 Vra-Chr6 33707762 33709402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1748 K14496 - gmx:100778183 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1748 6 33707762 33709402 Vra6g1748 6 33707762 33709402 ECH
Vra6g1748 6 33707762 33709402 Vra5g1399 5 20721131 20722425 PCT