Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1718 ATGCAAGGCCTCCGCCGCTGCTCAAACGACGTCGTACACCTCGACCTCACCACTCCCACGCCGGCCACAACCAACTCCTCCACCACCTCATCCTCCTCGTCGCTCTCCATCGACGTGGAGGAATCCACGGAGGCGCGTATCCAGCGGCTCATATCGGAGCATCCGGTGATCATCTTCACGCGCTCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATAGGAGTCAACCCCACCGTCATCGAATTGGATGACCACGAGATAACGGCCCTCCCGGACGCCACCCGCACTCCCGCCGTCTTCATCGGCGGTTCCTCCGTCGGCGGCCTGGAGTCCCTCGTCGCCCTCCACGTCAGCGGCCACCTCGTCCCCAAACTTGTCCAAGTCGGCGCCCTCTGGGTATGA 414 0.6329 MQGLRRCSNDVVHLDLTTPTPATTNSSTTSSSSSLSIDVEESTEARIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIELDDHEITALPDATRTPAVFIGGSSVGGLESLVALHVSGHLVPKLVQVGALWV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1718 137 MobiDBLite consensus disorder prediction 15 38 - -
Vra6g1718 137 PANTHER GLUTAREDOXIN 5 136 IPR011905 -
Vra6g1718 137 Gene3D Glutaredoxin 37 136 - -
Vra6g1718 137 ProSiteProfiles Glutaredoxin domain profile. 44 136 - -
Vra6g1718 137 SUPERFAMILY Thioredoxin-like 44 136 IPR036249 -
Vra6g1718 137 Pfam Glutaredoxin 56 109 IPR002109 -
Vra6g1718 137 PANTHER GLUTAREDOXIN-C6 5 136 - -
Vra6g1718 137 CDD GRX_GRXh_1_2_like 55 128 - -
Vra6g1718 137 TIGRFAM GlrX-like_plant: glutaredoxin-like family 47 137 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1718 Vra-Chr6 33385531 33386251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1718 46 137 Miscellaneous Gene Families AT4G15700 43.000 3.13e-25 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1718 - - gmx:100778024 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1718 6 33385531 33386251 Vra5g1389 5 20639907 20641015 PCT