Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1389 ATGCAAGGAATAGGAGCAGGATTTGTGAGTTCAAACGAGGTAGAGCTGAGTCCCACTATGAGTAACTCGTCCTCACTGTCCATGGAGCTAGACGAGTCTACCGAGACCAGGATCCAACGCCTCATATCGGAGCATCCGGTCATCATCTTCACCCGATCCTCCTGCTGCATGTGTCATGTCATGAAGAATCTCTTAGCCACCATCGGTGTTCATCCCACCGTCATCGAATTAGATGATAATGAGATCGCCGCCCTTCCCCTCCCAGACACCATCGCCCCTGCAGCATTCATTGGCGGCACCTGCATCGGTGGCCTTGAATCCCTTGTCGCACTCCATGTCACCGGCCACCTCATTCCTAAACTCGTCCAAGTCGGCGCTCTCTGGGTATGA 390 0.5359 MQGIGAGFVSSNEVELSPTMSNSSSLSMELDESTETRIQRLISEHPVIIFTRSSCCMCHVMKNLLATIGVHPTVIELDDNEIAALPLPDTIAPAAFIGGTCIGGLESLVALHVTGHLIPKLVQVGALWV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1389 129 SUPERFAMILY Thioredoxin-like 34 128 IPR036249 -
Vra5g1389 129 Pfam Glutaredoxin 47 83 IPR002109 -
Vra5g1389 129 Gene3D Glutaredoxin 27 128 - -
Vra5g1389 129 TIGRFAM GlrX-like_plant: glutaredoxin-like family 38 129 IPR011905 -
Vra5g1389 129 PANTHER GLUTAREDOXIN-C6 13 128 - -
Vra5g1389 129 ProSiteProfiles Glutaredoxin domain profile. 35 128 - -
Vra5g1389 129 PANTHER GLUTAREDOXIN 13 128 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1389 Vra-Chr5 20639907 20641015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1389 37 129 Miscellaneous Gene Families AT4G15660 41.584 7.21e-23 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1389 - K03676 gmx:100791969 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1718 6 33385531 33386251 Vra5g1389 5 20639907 20641015 PCT