Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1699 ATGTACAACTTAGACAAACCACAGAGAGACGATGAAAACAAGCTACTAACCCCATCTTTCTCTACCACTCTCCTTGACCAAATCTACCGTTCCATCGACGAGGGAGAGAGAAAAAACGGCGAAACCAAGTTCTACAGACACACAACAATGACCACCACCAAGAAACAGAGCAGTAGGGGCAATTCGAAATCCATGGATGCGGATAGAAAATATGTCGGCGCCAAAACCGACAAAAAAAAAGTGCACCGCGACGAGGATGCTTTGTTCTTCAGCTCCACCTCGCTTTCCTCGGATTCCAGCTTTGGATTCTCTTCCTCCGACAACGAATCCATCTCGCGCGAATCGTGTCTCGCGCCGCGCGCCAGGCTCGTGGGCGGGAGCGCGTCGTTCCGGTCGGAGAGATACGGGATTCGCGTGTTCGAGGGTTTGTGTCGGAACTCCCACACCTCTGAGGAGCGACACGTGGCGGTTCGCGACGAGGAGATGTTGATAAAATCCAAGTCCCGGGCGTTGAAGATTTACAACAACCTTAAAAAAGTGAAACAACCGATTTCTCCTGGTGGTCGTGTCACGAGTTTCCTCAACTCACTCTTCGCCAACACTAAGAAAACAAGCTCCCGCTCCTGCGGCGAAGTGCAGCACACTGCTTCTTCTTCATCTTCATCATCATCCACCTCTTCCTCTTCCTACTATTCCTCTACATGCTCTTCTGCTTCCTCATTGTCCAGGTCTTGTTTGAGCAAAACCATGTCTTCAGGAAGAGAGAGGATGCGCAGTGGGGTGAAGCAAACAGTGCGATTTTACCCCGTGAGTGTGATCGTTGGTGAAGATAGTAGACCCTGTGGGCACAAACGTTTGTGTGAAGAGGAAGAAGCTTCAAGAGGGTTCTTGAGAGAGTACCGACAAAACCCGAAGAAGAGCAATGATTTAGTTTTGAAGGAGTTGTCTTCGAGGAGTAAAGTTGATTACGAGGATGATGATGACGATGATGATGCGTCGAGTTATGCAAGTTCGGATCTCTTCGAGCTTGATCATTTGGCTGTGTTTGGAAGTGAAAGGTACTGTGAGGAGCTTCCAGTGTATGAAACCACTCATGTTGGTACTAACCGCGCCATTGCTAATGGCCTCATAGTGTAA 1137 0.4899 MYNLDKPQRDDENKLLTPSFSTTLLDQIYRSIDEGERKNGETKFYRHTTMTTTKKQSSRGNSKSMDADRKYVGAKTDKKKVHRDEDALFFSSTSLSSDSSFGFSSSDNESISRESCLAPRARLVGGSASFRSERYGIRVFEGLCRNSHTSEERHVAVRDEEMLIKSKSRALKIYNNLKKVKQPISPGGRVTSFLNSLFANTKKTSSRSCGEVQHTASSSSSSSSTSSSSYYSSTCSSASSLSRSCLSKTMSSGRERMRSGVKQTVRFYPVSVIVGEDSRPCGHKRLCEEEEASRGFLREYRQNPKKSNDLVLKELSSRSKVDYEDDDDDDDASSYASSDLFELDHLAVFGSERYCEELPVYETTHVGTNRAIANGLIV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1699 378 MobiDBLite consensus disorder prediction 36 78 - -
Vra6g1699 378 MobiDBLite consensus disorder prediction 45 60 - -
Vra6g1699 378 MobiDBLite consensus disorder prediction 61 78 - -
Vra6g1699 378 PANTHER PROTEIN BIG GRAIN 1-LIKE B 75 378 - -
Vra6g1699 378 PANTHER PROTEIN BIG GRAIN 1-LIKE B 1 67 - -
Vra6g1699 378 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 75 378 IPR039621 GO:0009734
Vra6g1699 378 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 67 IPR039621 GO:0009734
Vra6g1699 378 MobiDBLite consensus disorder prediction 208 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1699 Vra-Chr6 33071627 33073496 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1699 - - var:108337614 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1699 6 33071627 33073496 Vra6g1699 6 33071627 33073496 ECH
Vra5g1361 5 20422395 20424768 Vra6g1699 6 33071627 33073496 ECH
Vra7g2603 7 46309382 46311039 Vra6g1699 6 33071627 33073496 ECH
Vra9g0306 9 2435087 2437076 Vra6g1699 6 33071627 33073496 ECH