Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1361 ATGTACGCCCTCGACATTTCACACACACAACACACCTTCGGCCTCCAAAGCAACGCTAAAACCCCCTCTTTCTCCTCCTCTCTCCTCGACACCATCTACCGCTCCATCGACGAAGGAGAGACCACCGCCAACGACATGAAACTCCACACCCAGACAATCATCAAGAAACAGAGCAGAATCCTCGTCCAACAAGATTTAACGGCGCCGACCATTCCCCGTTCTTGTTTACTGCAAAAATGGAAGGGAAGCGAGAAAACGGTGAAAGCACAGATGGAGAGAAAACCAAAATCGCGTTTGCATGGTCACGATCACGACCGGGAGGTGATGTTCTTCAGTTCGACTTCGAGTTGCTCGGATTCCAGCTCTGGATTACTGTCTTCCTCTGACACTGAATCCCTGTACGGATCGAGGTCGCGAGTTTCGTGTTTTGCTCCTTCGAGACCCAAGCCATTGATGACGTCGGCGAGCAATGAAGAGCGTCTGATAAAGCCAAAATCGAGGGCGTTGAAGATGTACAACAATCTGAAGAAAGTGAAGCAACCCATCTCTCCGGGGGGGAAGCTGAGTACTTTTCTCAGCTCTCTGTTGGGGAACGCGAAGAAAGCCAAAACCTTGGACGAAGCAAAATCCAAGTCGGGACAAGAATCCACGTGTTCCTCTGCGTCCTCGTTCTCACGCTCTTGTTTGAGCAAGGCTTCGACTTCCTCGAACAAATTGCGCAACGGGGTTAAGCGAACGGTGCGGTTTTACCCCGTGAGCGTGATCGTGGACGAGGATTGTCGACCATGCGGGCACAAGTGTTTGTACGAAGAAGACGCCACGCGCGTAATGGCGTTGTCTATGCCAACGGCGTGGAAAATTGGACGCAACAAGAACGAAGAAGAGGAAAAGGTTGTGGATAAGAGCAGACGCGTGGAGGAGGCGGCCAGAGAGTTTTTGAAAGAGTACCACCGAAGTCAGAAAAGGAGCAACTTGATTAATGTCAGGGATTTTCCCAATGCGGTGGAAGATGAAGACGAAGACGAAGACGATCAAGATACAGATAATGACGATGCAGCGAGTTATTCAAGTTCGGATCTTTTTGAGCTCGATCACCTTTCAGTGATGGGAAACAATAGGTATCGTGAGGAGCTTCCGGTGTACGAGACTACACATGTCAGTACCAATCGCGCCATTGCCAATGGCCTAATATAA 1194 0.5 MYALDISHTQHTFGLQSNAKTPSFSSSLLDTIYRSIDEGETTANDMKLHTQTIIKKQSRILVQQDLTAPTIPRSCLLQKWKGSEKTVKAQMERKPKSRLHGHDHDREVMFFSSTSSCSDSSSGLLSSSDTESLYGSRSRVSCFAPSRPKPLMTSASNEERLIKPKSRALKMYNNLKKVKQPISPGGKLSTFLSSLLGNAKKAKTLDEAKSKSGQESTCSSASSFSRSCLSKASTSSNKLRNGVKRTVRFYPVSVIVDEDCRPCGHKCLYEEDATRVMALSMPTAWKIGRNKNEEEEKVVDKSRRVEEAAREFLKEYHRSQKRSNLINVRDFPNAVEDEDEDEDDQDTDNDDAASYSSSDLFELDHLSVMGNNRYREELPVYETTHVSTNRAIANGLI* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1361 397 PANTHER PROTEIN BIG GRAIN 1-LIKE B 1 397 - -
Vra5g1361 397 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 397 IPR039621 GO:0009734
Vra5g1361 397 MobiDBLite consensus disorder prediction 327 356 - -
Vra5g1361 397 MobiDBLite consensus disorder prediction 334 350 - -
Vra5g1361 397 Coils Coil 291 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1361 Vra-Chr5 20422395 20424768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1361 - - gmx:100809904 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1361 5 20422395 20424768 Vra5g1361 5 20422395 20424768 ECH
Vra5g1361 5 20422395 20424768 Vra6g1699 6 33071627 33073496 ECH
Vra7g2603 7 46309382 46311039 Vra5g1361 5 20422395 20424768 ECH
Vra9g0306 9 2435087 2437076 Vra5g1361 5 20422395 20424768 ECH