Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1677 ATGGTTGAAGAGGACAAAAAAATGGTGAAAGGAAGCGAAATTGATGGCATAGAAGTACCAGAAGCAGTGATGGAGACTCTGAACCGAACCTCCGGAAGCCTTCAACAGCTGGAGACTGAGTTACCCCAATTCCTCGCTCTATCTGATCCTGACCTTCTCGCTCAACTGCCATTTCTCCAACGCGCCCACTCACTTTTCTCACTCGCCAAACTCACTTCCACCCTCTTCTCATTGAAGTTGAGGTGCAGAGGAGTTAACCCAAATGATCATCCTGTGAAATCCGAGCTTGACAAGTTAAAGGTGTTGGAGAAGAAACTGGATCGACTTCGGCGGTTGAGTGAAGCACAGGAGCAAGACATTAGGAACATAGATGGAGAGGAGGGACTAGAGATGAACTATGAGGAGCAGGCTGGTAAAAAGAGGAAGTATCCATCTTCTGAAGAGCCATCTATTCAAATTGATGATATGGAGTCCTTGGAGAAAGTAAAGGAGGAACATCTTGGTTATAACAGTGGAAATGCTAAGGGAATAGTAATTGACATTTCAGATGATGATGAGTTTATGTGA 567 0.4462 MVEEDKKMVKGSEIDGIEVPEAVMETLNRTSGSLQQLETELPQFLALSDPDLLAQLPFLQRAHSLFSLAKLTSTLFSLKLRCRGVNPNDHPVKSELDKLKVLEKKLDRLRRLSEAQEQDIRNIDGEEGLEMNYEEQAGKKRKYPSSEEPSIQIDDMESLEKVKEEHLGYNSGNAKGIVIDISDDDEFM* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1677 188 MobiDBLite consensus disorder prediction 126 154 - -
Vra6g1677 188 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 8 186 IPR011082 -
Vra6g1677 188 Coils Coil 92 126 - -
Vra6g1677 188 PANTHER EXOSOME-ASSOCIATED FACTOR RRP47/DNA STRAND REPAIR C1D-RELATED 8 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1677 Vra-Chr6 32797798 32800859 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1677 K12592 - gmx:100500667 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1677 6 32797798 32800859 Vra6g1677 6 32797798 32800859 ECH
Vra6g1677 6 32797798 32800859 Vra5g1305 5 19973143 19978623 PCT