Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1305 ATGGTGAAAGCAAGTGAGAGCGGTGCAGTTCCTGAGCCGGTTATGGATGCAGCTAACGCCACTCTCTCCAACCTTCAACTACTCCGAACGCATTTTAACGACTTTTTGTCGCTCTCCGAACCTCAAACCCTCTCCCAAATGCCCCCTCTTCAACGCGCTCACGTTCTCTTCATCCTCGCTAAAATCACCTCTACCCTTCTCGAATTGAATTTGAGATGTAGTGGGGTCCACCCAGATGACCATCCCATCAAATCAGAGCTCGACAGAATGAACTTGTACGAGGACAAACTGGAACGTATGGTTGATTTGAGTAAAGCTCCACTGCGACCTTCCACTACCTTGAATTATCAGGCGGCTACACGCTTCATAGAACACTCGCTGCCTGACCTAACTTCTGAGCAGAGGGAAAATATGAGGAACATAAGTAGAGGGGAGAGAACAAAGACAAACCTTCCTGGTCGGGCAGGTCAAAAGAGGAAGTATCAGTCTTCTGAAAAACAATCTGTTAAAGCAGCTGCCAAGGATTTTTTGGAGAAAGCTGCCCGGGAGCTTCTTGGTGATACCAGTGGTGGTATTAAGGGACCGCTACAAGTTGACATGTCAGAGGATGATGACGACAAACAGCCCTTATCTTGA 636 0.478 MVKASESGAVPEPVMDAANATLSNLQLLRTHFNDFLSLSEPQTLSQMPPLQRAHVLFILAKITSTLLELNLRCSGVHPDDHPIKSELDRMNLYEDKLERMVDLSKAPLRPSTTLNYQAATRFIEHSLPDLTSEQRENMRNISRGERTKTNLPGRAGQKRKYQSSEKQSVKAAAKDFLEKAARELLGDTSGGIKGPLQVDMSEDDDDKQPLS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1305 211 PANTHER NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D 8 206 - -
Vra5g1305 211 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 8 206 IPR011082 -
Vra5g1305 211 MobiDBLite consensus disorder prediction 131 171 - -
Vra5g1305 211 MobiDBLite consensus disorder prediction 183 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1305 Vra-Chr5 19973143 19978623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1305 K12592 - gmx:100795174 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1305 5 19973143 19978623 Vra5g1305 5 19973143 19978623 ECH
Vra6g1677 6 32797798 32800859 Vra5g1305 5 19973143 19978623 PCT