Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1588 ATGGATATTCCGCGCAAATGTCTCTTATCTCCAATTCTCGCGCTCATTCTACTTTCGTTCATCGTCGTCGTGGTGCTGCGTCCAGTTCAGTTACTCCAATTCACGACAATCGCTGCTCCAAAACGTGGACATTCCGTTTCTCTGGATCATCTGCGAATGAAGCTCTCCGGCGAGAATCAACTTCACGCCGTCGTAAATTCCGGCGAATTTCGACGTAACAAATTCAGTGATGACCGAGGTTCTACCAGGAAGAAGGTAGGAAAAGTAGAACAAACACTCGCGGCGGCGAGAGCTTCGATGCGAAAGGCTGCGTCAGAATCAGAAGGTGATGAGAGGAGCAATCACACTGTGGCAACCACCGTGCATGACGGCGGAGACCGCCACTATGTACCAGCCGGAGCTATCTATCGTAACGCTCGCTTGTTTCATCGGAGCTACCTAGAGATGGAGAAAATATTCAAAGTATACGTATACCCAGAGGGTGAGCTCCCAATAGCTCATGATGGCCCGTGCAAAGACATATACTCAATTGAAGGAAGATTCCTCCATGAGATGGAACATGGTCCAGGGAGGTTTAGGACCAACGACCCCAATGCCGCTCACGTTTACTTCTTGCCATTCAGCGTTACTTGGATGGTGAAGTATCTCTATACTCCACTTTCATACAATGTCACTCCTTTAAAGCAGTTTGTTTCTGACTATGTGAGACTCATATCCATGAGGCATCCCTTCTGGAATACAACTCATGGTGCCGACCACTTCATGCTTTCCTGTCATGATTGGGCTCCTCATGCATCACAGGGAAATCCCTTCCTCTACAACACCTCCATCCGTGTCATGTGCAACGCCAACACCTCAGAGGGCTTCAACCCTCGAAAGGACGTCTCCCTTCCAGAAATCCACCTTTACGGAGGCGAAGTCTCCCCCAAACTTCTCTCGCCCCCATCCAACAACACCCCACGCCGCTACCTCGCCTTTTTCTCCGGCGGTCTTCACGGTCCAATCCGCCCCAGCCTCCTCCACCACTGGAAGAACCACGACGCTGACATTCGCGTCTACGAATACCTCCCCAAAGACCTTGACTACTACTCCTTCATGCTCAACTCCAAGTTCTGTCTTTGTCCCAGTGGCCACGAAGTGGCCAGTCCCAGAATCGTGGAAGCAATTTATGCCGAATGCGTTCCTGTCATCCTTTCCAAGTATTACGTGTTGCCCTTCGGTGATGTGCTGCAATGGAAGGCGTTTTCGGTGCAGGTGGAGGTTTCAGATATTCCTAGGTTGAAAGAGATTCTTAGTTCGATTTCCGAGGATGAATATTGGAAGCTCAAGGAGGGAGTGAAGGCTGTGAGGAAGCATTTTACACTGAATCGGCCTGCCAAGAGATTCGATGTTTTTCACATGATCTTGCACTCTATATGGTTAAGGAGACTAAACATACAACTCAGATAG 1449 0.4941 MDIPRKCLLSPILALILLSFIVVVVLRPVQLLQFTTIAAPKRGHSVSLDHLRMKLSGENQLHAVVNSGEFRRNKFSDDRGSTRKKVGKVEQTLAAARASMRKAASESEGDERSNHTVATTVHDGGDRHYVPAGAIYRNARLFHRSYLEMEKIFKVYVYPEGELPIAHDGPCKDIYSIEGRFLHEMEHGPGRFRTNDPNAAHVYFLPFSVTWMVKYLYTPLSYNVTPLKQFVSDYVRLISMRHPFWNTTHGADHFMLSCHDWAPHASQGNPFLYNTSIRVMCNANTSEGFNPRKDVSLPEIHLYGGEVSPKLLSPPSNNTPRRYLAFFSGGLHGPIRPSLLHHWKNHDADIRVYEYLPKDLDYYSFMLNSKFCLCPSGHEVASPRIVEAIYAECVPVILSKYYVLPFGDVLQWKAFSVQVEVSDIPRLKEILSSISEDEYWKLKEGVKAVRKHFTLNRPAKRFDVFHMILHSIWLRRLNIQLR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1588 482 MobiDBLite consensus disorder prediction 103 117 - -
Vra6g1588 482 MobiDBLite consensus disorder prediction 101 123 - -
Vra6g1588 482 PANTHER EXOSTOSIN FAMILY PROTEIN 71 481 - -
Vra6g1588 482 Pfam Exostosin family 151 434 IPR040911 -
Vra6g1588 482 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 71 481 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1588 Vra-Chr6 31339118 31344142 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1588 - - gmx:100794890 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1588 6 31339118 31344142 Vra6g1588 6 31339118 31344142 ECH
Vra5g1030 5 16724941 16728421 Vra6g1588 6 31339118 31344142 PCT