Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1030 ATGGATCGGGGGTTTAGATTTCTGTGTAAGGCTGAAACTACGAGATTAGTTTCATTTGTAGGAATGGCAGTGGCTATAGTTTTAATGTTTCAGTATTCTGAACTTCCAAGTGCTAAATTCTTATCTTCTGTTACTACCAAGATTGCTAGTTTTAGAATGGATACATCTTTGGTTAATTCTGAAGTGGAGGGTAACAACATGCACCTAAATGGTTCAAATTCAAACTCTAAAGATGCAGTGGAAGAGAATGCAGTTAGTCGTGCGGACTCCCTCTTTCACAATGGCAGAGATTCAATCACTGCCCCTGCACCAGAGAAAGCTAAAGGACTTACTGATAGTGTTGTTAATTTCACAACCAGAAATTATGTTCCTCCAATTGGTAGTGCTCCGGAAAAGCAACTTAGTTTGACATCACAAGGGGCTGCATCACCACAACCTATGGTGCCATTGCCCAACAGAACATCCTTAGATTCGGAAACGGATTCAAGAAGTCCTGTGGTATCTGTCACTTCAGCTTCAACTTCGGTGAAATCGAATTCAACTGGTTCGGTTTCCAAGGATGGAAAGTCAGGTTCTTTGCAAGGTAGTAGTAACTCGACAGTCAATAACGGTAAGCCTGTGAGTGCAAAGAATTCCAAAAGGAGACCATCTAAAGTTGTTTCAATATCTGAGATGAACTTGTTATTGCAGATTAATCATGCTTATTCCCAGCAAGAGAAACCAGAAAGGTATTCAGGGGTTGATCTAGAAATATTCCGTGCAAAATCAGAGATTTTAAATGCACCCATCGCTGTGAATGATTCAAGACTTTACCCACCATTATATAGGAATGTCTCCATGTTCAGAAGGAGTTATGAACTAATGGAAAAGAAGCTGAAAGTTTTCATCTACCCGGATGGAGACAGACCAATCTTTCACGAGCCCTTACTAGATGGAATATACGCATCTGAAGGATGGTTCATGAAATTAATGGAAGCAAACAAACAGTTTGTCACTGGGGACCCTGAGAAAGCTCACTTGTTTTACATTCCTTTCAGTTCCAGATTGTTGCAGCAAACTCTGTATGTACGTAACTCACACAGACGTTCCAACTTAATTGAGTACATGAAAAATTTTGTGAACATGATTGCTGGAAAATATCCTTTCTGGAACAGAACTTCTGGAGCAGATCACTTTGTCGTTGCTTGCCACGATTGGGCTCCTGCAGAAACAAGAGGGCGCATGCTTAGTTGCATCAGAGCCCTCTGCAATGCTGACATTGAAGTAGGATTCAAGATAGGCAAGGATGTTTCTCTTCCGGAAACATACATAAGATCAAGTGAGAATCCTGAAAAAAATATTGGGGGCAACCCTCCTTCTCAAAAGCCTATATTGGCTTTTTTTGCAGGAGGTTTGCACGGTTATGTTCGGCCTATACTGTTGGAGCACTGGGAGAACAAAGAAGCGGACATGATTATATCTCGAACCTTGCCACATGTCAGGGGCAACAAAAACTACATAGAGTTCATGAAGAGTAGCAAATTCTGCATTTGTGCAAGAGGTCACGAGGTTAATAGCCCGCGTGTGGTAGAGGCTATATTCCACGAGTGCATTCCAGTTATCATATCTGACAATTTTATTCCTCCTTTCTTTGAGATTTTGGACTGGGAATCTTTTGCTGTGTTTGTCACCGAGGAAGACATCCCGAATTTGAGGAACATTCTGCTATCAATTTCTGAAGAGAGATACTTAGAGATGCATAAGAGGGTGAAAAGGGTGCAAGAGCATTTTATCTGGCATGCTGAACCTGTAAAGATTCATAACTTATGTTTGGTAAATGCCATGAGTTATACAAATGAAGCAAGAGGAAAATGA 1854 0.4094 MDRGFRFLCKAETTRLVSFVGMAVAIVLMFQYSELPSAKFLSSVTTKIASFRMDTSLVNSEVEGNNMHLNGSNSNSKDAVEENAVSRADSLFHNGRDSITAPAPEKAKGLTDSVVNFTTRNYVPPIGSAPEKQLSLTSQGAASPQPMVPLPNRTSLDSETDSRSPVVSVTSASTSVKSNSTGSVSKDGKSGSLQGSSNSTVNNGKPVSAKNSKRRPSKVVSISEMNLLLQINHAYSQQEKPERYSGVDLEIFRAKSEILNAPIAVNDSRLYPPLYRNVSMFRRSYELMEKKLKVFIYPDGDRPIFHEPLLDGIYASEGWFMKLMEANKQFVTGDPEKAHLFYIPFSSRLLQQTLYVRNSHRRSNLIEYMKNFVNMIAGKYPFWNRTSGADHFVVACHDWAPAETRGRMLSCIRALCNADIEVGFKIGKDVSLPETYIRSSENPEKNIGGNPPSQKPILAFFAGGLHGYVRPILLEHWENKEADMIISRTLPHVRGNKNYIEFMKSSKFCICARGHEVNSPRVVEAIFHECIPVIISDNFIPPFFEILDWESFAVFVTEEDIPNLRNILLSISEERYLEMHKRVKRVQEHFIWHAEPVKIHNLCLVNAMSYTNEARGK* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1030 617 MobiDBLite consensus disorder prediction 131 217 - -
Vra5g1030 617 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 165 599 IPR004263 GO:0006486|GO:0016757
Vra5g1030 617 PANTHER GLYCOSYLTRANSFERASE PLANT-LIKE PROTEIN 165 599 - -
Vra5g1030 617 MobiDBLite consensus disorder prediction 125 217 - -
Vra5g1030 617 Pfam Exostosin family 289 569 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1030 Vra-Chr5 16724941 16728421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1030 - - gmx:100817335 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1030 5 16724941 16728421 Vra5g1030 5 16724941 16728421 ECH
Vra5g1030 5 16724941 16728421 Vra6g1588 6 31339118 31344142 PCT