Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1573 ATGTCTCTCAAACCGTCAAATTCGTCGCAGAATCTCATGCTTCCCGTCTCCGATCCTCCCTCCAACCAAGACGATTACGCCGACGACAAGCTCTTCAGAGGCTCCGCCATGACCAAACGCGGAGCCTTTGCCGCCGTCTCTTACATGTCCTGCGCTGTTTTGCTGGTCATGTTCAATAAAGCAGCGCTTTCGTCTTATAATTTTCCCTCCGCCAACGTCATCACACTTCTTCAGATGGTGTGTTCGTGTTGCTTCCTCTATTTGTTGAAACGGTGGAGGATGATATCTTTCTCAGCAAATGAATCCTTACTTATATCAGATACGTCAACAAAATTTGTATCAGTGAAGACTTTGAAGCACACTCTTCCTCTGTCAGGAGCATACTTATTTTACATGCTAGTCACCATGGAGTCTGTTCGGGGAGTAAATGTTCCAATGTACACAACTCTGAGGAGGACCACAGTGGTGTTTACAATGCTTGTTGAGTTTGCTCTGGTGGGGCAGAGGTATACACGTTCTGTCATTTTAAGTGTTGGCTTGATTGTCTTTGGTGCCTTTGTTGCGGGAGCTCGGGATTTTTCTTTTGATGCTTATGGCTATGCTGTTGTTTTCATGTCAAACATCGCCACAGCAATATACCTTGCAACTATATCCCGCATTGGGAAAACTAGTGGTCTTAATAGCTTTGGGCTTATGTGGTGCAATGGTATCATATGTGGGCCTGTTTTACTGATCTGGACATTTGTTCGTGGTGATTTGAAGATATCAATCAATTTTCCATATCTCTTCTCACCTGGTTTTATGGTTATTTTGCTTTTTTCCTGCATACTGGCATTCTTCTTGAATTACTGTATTTTCCTGAACACAACTCTAAATTCAGCTGTCACACAGACAATTTGTGGTAATCTGAAGGATCTATTTACTATTGGTCTTGGCTGGATAATTTTTGGTGGGCTACCTTTTGATATTTGGAACATATCCGGGCAATTTCTTGGTTTTGCTGGATCTGGTCTATATGCCTACTACAAGCTCATTGGGAAATAA 1044 0.4262 MSLKPSNSSQNLMLPVSDPPSNQDDYADDKLFRGSAMTKRGAFAAVSYMSCAVLLVMFNKAALSSYNFPSANVITLLQMVCSCCFLYLLKRWRMISFSANESLLISDTSTKFVSVKTLKHTLPLSGAYLFYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFALVGQRYTRSVILSVGLIVFGAFVAGARDFSFDAYGYAVVFMSNIATAIYLATISRIGKTSGLNSFGLMWCNGIICGPVLLIWTFVRGDLKISINFPYLFSPGFMVILLFSCILAFFLNYCIFLNTTLNSAVTQTICGNLKDLFTIGLGWIIFGGLPFDIWNISGQFLGFAGSGLYAYYKLIGK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1573 347 Pfam Triose-phosphate Transporter family 51 339 IPR004853 -
Vra6g1573 347 PANTHER BNAA08G30680D PROTEIN 14 347 - -
Vra6g1573 347 MobiDBLite consensus disorder prediction 1 22 - -
Vra6g1573 347 PANTHER SOLUTE CARRIER FAMILY 35 14 347 - -
Vra6g1573 347 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1573 Vra-Chr6 31092412 31101339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1573 50 283 Organic Solute Cotransporters AT2G13650 24.481 2.90e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1573 K15281 - gmx:100819763 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1573 6 31092412 31101339 Vra6g1573 6 31092412 31101339 ECH
Vra6g1573 6 31092412 31101339 Vra5g1214 5 18532162 18539297 PCT