Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1214 ATGTCTCTAAAACCGTCCTATTCGGCGGAGAATCTGATGCTTCCGGTATCCGATCCTCCCAACGAAGAAGACAGAGAGAGGCTTTTGAAGAGCGATAGTAAGACCTTCCGAGGACGAAGGATTTACGCTGCCATTTCTTACATGTCATGTGCAGTGCTCTTGATACTGTTCAACAAAGCTGTTCTTTCCTCCTATGGCTTCCCGTCTTCGAGTATCGTCACGCTTCTTCAGATGGTATGTTCATGTTGTTTTCTTTATGTATTGAGGCGCTGGAGGATGATTTCTCTCATAGCAGGCGAGTCAGTTATTACAGCAGATAACTCGAAGAAGTTTGTGCCACTGAGGACTTTGAAGCACACTCTTCCTCTAGCAGGAGCATATTTACTTTACATGTTAGTCACCATGGAGTCTGTCCGTGGAGTAAATGTTCCAATGTACACCACCCTTAGGAGGACCACAGTGGCATTTACAATGCTTGTAGAATATATGCTGATGGGGCATAGGTACACATCTTCTGTCACTTTCAGTGTTGGCTTGATTGCCTTTGGTGCATTTATTGCGGGAGCACGGGATTTCTCCTTTGATGCCTATGGCTATGCCATTGTTTTTCTGTCAAACATCACCACAGCTATATATCTTGCAATGATAGCCCGTGTTGGAAAAACTAGTGGCCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTAAGCTGATCGATTGTACAAAATGGCCTATCAAACTTTATTTTCCTGGTATCATATGTGGGCCCTTTTTGGTTATTTGGACTTTAGTACGGGGTGACTTGAAGATGACACTCAACTTTCCATACCTTTTTTCACCTGGTTTTGTTGTTGTTTTGCTTTGTTCCTGCATACTTGCTTTCTTCCTGAATTACAGTATTTTTCTGAACACAACTCTCAATTCAGCCCTGACTCAGACAATATGTGGTAATCTGAAGGATCTATTCACTATTAGCTTTGGCTGGATAATTTTTGGTGGGCTACCCTTTGATTTTTGGAATGTAGTGGGACAACTTCTGGGTTTTGTGGGCTCTGGTTTATTTGCCTACAATAAGCTCATCGGCAAATAA 1089 0.4261 MSLKPSYSAENLMLPVSDPPNEEDRERLLKSDSKTFRGRRIYAAISYMSCAVLLILFNKAVLSSYGFPSSSIVTLLQMVCSCCFLYVLRRWRMISLIAGESVITADNSKKFVPLRTLKHTLPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVAFTMLVEYMLMGHRYTSSVTFSVGLIAFGAFIAGARDFSFDAYGYAIVFLSNITTAIYLAMIARVGKTSGLNSFGLMWCNGKLIDCTKWPIKLYFPGIICGPFLVIWTLVRGDLKMTLNFPYLFSPGFVVVLLCSCILAFFLNYSIFLNTTLNSALTQTICGNLKDLFTISFGWIIFGGLPFDFWNVVGQLLGFVGSGLFAYNKLIGK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1214 362 MobiDBLite consensus disorder prediction 1 24 - -
Vra5g1214 362 PANTHER SOLUTE CARRIER FAMILY 35 26 362 - -
Vra5g1214 362 Pfam Triose-phosphate Transporter family 51 353 IPR004853 -
Vra5g1214 362 PANTHER BNAA08G30680D PROTEIN 26 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1214 Vra-Chr5 18532162 18539297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1214 34 235 Organic Solute Cotransporters AT2G13650 25.359 1.67e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1214 K15281 - gmx:100778544 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1214 5 18532162 18539297 Vra5g1214 5 18532162 18539297 ECH
Vra6g1573 6 31092412 31101339 Vra5g1214 5 18532162 18539297 PCT