Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1541 ATGGGTTCTTGCAAACCCCAACAAGAACATGTTCATGGACCTATCATCATAGGTGCCGGTCCTTCAGGCCTAGCCGTGGCTGCGTGTCTCTCGGAGCACAAAGTCCCTTTCGTGATTCTTGAGAGAAGCAACTGCATAGCCTCTCTTTGGCAACACAAAACCTACGACCGTCTCAAACTCCACCTCCCAAAGCAGTTCTGCGAGCTTCCCTTGAAAGGTTTTCCCCACAACTTCCCCAAGTACCCCACAAAGTACCAGTTCATATCCTACATGGAGTCCTACGCCTCACACTTCAACATCCACCCCAGGTTCAACCAAACAGTCGAAACTGCTCACTTTGATAAAGCCTCTCAGCTTTGGCTCGTTAGGACTCAGCACTGTCAGCTTCTCTCTCCTTGGCTCGTCGTGGCCACCGGGGAGAATGCTGAGCCTGTGCTTCCTAGAATTCATGGCATGGACCATTTCTCTGGCTCCATTGCTCACACCAGTGTCTACAAGTCTGGCTCTGAGTACACAAACCAGAAGGTTCTCGTCATTGGCTGTGGCAATTCAGGAATGGAAGTTAGCTTAGACCTTTGCAGACACAATGCCTCCCCTTACATGGTTGCAAGGAACACAGTGCATGTCCTTCCTAGGGAGATGTTTGGCTTCTCAACTTTTGGCATAGCCATGGCTCTTTACAAGTGGTTTCCCATCAAAGTTGTAGACAAAATTCTCTTACTTGTGACCAACTTCATGTTGGGAAACACAAATCACTATGGCATCAAAAGGCCTAAAACAGGCCCAATAGAGCTGAAACTAGCCACAGGGAAAACCCCAGTCCTTGATGTGGGTCAAGTTGCACAGATCAAATGTGGCAACATAAAGGTGATGGAAGGTGTGAAGGAGATAACTAGAAAAGGTGCGAAATTTATGGATGGACAAGAAAAGGAATTTGATGCTATAATATTGGCAACAGGGTACAAGAGCAACGTGCCTGCTTGGCTTAAGGGTTGTGATTTTTTCACTGAGGATGGAATGCCGAAAACACCCTTTCCCCATGGGTGGAAAGGGGAGCAGGGATTGTATACGGTGGGGTTCACCAGAAGAGGCATTCAAGGAACATCTTGTGATGCAATCAAGATCGCTGAAGACATAGCCTCGCAGTGGAGAACCGTAGAGAACAAGAATCAATGCAATTCACATATCATCCTTCTCACTTCATAA 1206 0.4735 MGSCKPQQEHVHGPIIIGAGPSGLAVAACLSEHKVPFVILERSNCIASLWQHKTYDRLKLHLPKQFCELPLKGFPHNFPKYPTKYQFISYMESYASHFNIHPRFNQTVETAHFDKASQLWLVRTQHCQLLSPWLVVATGENAEPVLPRIHGMDHFSGSIAHTSVYKSGSEYTNQKVLVIGCGNSGMEVSLDLCRHNASPYMVARNTVHVLPREMFGFSTFGIAMALYKWFPIKVVDKILLLVTNFMLGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQVAQIKCGNIKVMEGVKEITRKGAKFMDGQEKEFDAIILATGYKSNVPAWLKGCDFFTEDGMPKTPFPHGWKGEQGLYTVGFTRRGIQGTSCDAIKIAEDIASQWRTVENKNQCNSHIILLTS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1541 401 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 10 397 - -
Vra6g1541 401 SUPERFAMILY FAD/NAD(P)-binding domain 15 208 IPR036188 -
Vra6g1541 401 PRINTS Pyridine nucleotide disulphide reductase class-II signature 13 35 - -
Vra6g1541 401 PRINTS Pyridine nucleotide disulphide reductase class-II signature 132 140 - -
Vra6g1541 401 PRINTS Pyridine nucleotide disulphide reductase class-II signature 171 195 - -
Vra6g1541 401 PRINTS FAD-dependent pyridine nucleotide reductase signature 14 33 - -
Vra6g1541 401 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 193 - -
Vra6g1541 401 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Vra6g1541 401 Pfam Pyridine nucleotide-disulphide oxidoreductase 15 206 - -
Vra6g1541 401 Gene3D - 6 391 IPR036188 -
Vra6g1541 401 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 397 - -
Vra6g1541 401 SUPERFAMILY FAD/NAD(P)-binding domain 174 383 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1541 Vra-Chr6 30511543 30514503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1541 K11816 - gmx:100798781 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1541 6 30511543 30514503 Vra5g1168 5 18116316 18118574 PCT