Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1168 ATGGAGTCTTGCAAGGGACCAGAGGGAGAGGAAGTGAAGTGCGTGTGGGTTCATGGTCCTATAATCGTAGGGGCAGGACCCTCGGGGCTGGCCGTTGCAGCATGCCTCTCCCACCACGGACTACCCTACGTCATTCTCGAGAGGAGTCACTGCATAAACTCCCTTTGGCAACACAGAACCTACGACCGTCTCAAACTCCACCTCCCCAAACACTTCTGCCAACTCCCCTTCATGCCCTTCCCTCACCATTTCCCCAAATACCCCTCCAAGAATCAGTTCATCTCCTACCTCCATTCCTACGCTCAGCGCTTCAACATCCGCCCCAGGTTCAACCAGTCCGTTCACACCGCTCACTTCGACCCCGTTTCCCAGTTCTGGCTCGTCAGAACCAACGATTTTCAGTACATTTCCCCGTGGCTCGTCGTTGCTACCGGAGAGAATGCCGACCCTGTCATTCCCTCGATTCTTGGCATGGACTCCTTTCACGGACCCATTGTTCACACCAGCGCCTATAAATCCGGTTCTCATTACAAAAACAAGAGGGTTTTGGTAATTGGTTGCGGCAACTCGGGAATGGAAGTAAGCTTGGATCTTTGCAGGCACAACGCCACCCCTTACATGGTCGCCAGAAACACAGTACATGTGCTGCCTAGGGAGATGTTTGGCTTTTCTACGTTTGGAATGGCGATGGGTCTATTGAAATGGCTTCCGATAAAGTTGGTAGACAAGGTGGTATTGGCGTTGGCTGGGTTAATGTTAGGTGACACCGCCCGCTACGGGGTCAGGAGGCCAAAAACTGGGCCAATAGAGCTGAAACTTGTCACCGGTAAAACCCCTGTGCTAGATGTTGGACAAGTAGCGCAGATAAGATCCGGTAACATCAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAACGGTGCCAAGTTTATGGACGGACAAGAAAAGGAGTTCAGTGCTATAATATTAGCAACAGGTTACAAAAGCAACGTGCCCACTTGGCTTAAGAGCCGTGAATCTTTCACGAAAGACGGAATGCCCAAAACGCCGTTTCCAATGGGTTGGAAGGGAGAGAATGGATTGTATACGGTTGGGTTCACGAGAAGAGGTCTTCTTGGAAGTGCATCAGACGCCGTAAAGATTGCTGAAGACATAGCTGATCAATGGATGAGCGTTAAGGACAAATCATACCGTAATTCCCACATGATCTTGCTCAAGAGTACATAG 1227 0.5029 MESCKGPEGEEVKCVWVHGPIIVGAGPSGLAVAACLSHHGLPYVILERSHCINSLWQHRTYDRLKLHLPKHFCQLPFMPFPHHFPKYPSKNQFISYLHSYAQRFNIRPRFNQSVHTAHFDPVSQFWLVRTNDFQYISPWLVVATGENADPVIPSILGMDSFHGPIVHTSAYKSGSHYKNKRVLVIGCGNSGMEVSLDLCRHNATPYMVARNTVHVLPREMFGFSTFGMAMGLLKWLPIKLVDKVVLALAGLMLGDTARYGVRRPKTGPIELKLVTGKTPVLDVGQVAQIRSGNIKVMEGVKEITRNGAKFMDGQEKEFSAIILATGYKSNVPTWLKSRESFTKDGMPKTPFPMGWKGENGLYTVGFTRRGLLGSASDAVKIAEDIADQWMSVKDKSYRNSHMILLKST* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1168 408 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 10 396 - -
Vra5g1168 408 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Vra5g1168 408 Pfam Pyridine nucleotide-disulphide oxidoreductase 21 212 - -
Vra5g1168 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 20 39 - -
Vra5g1168 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Vra5g1168 408 SUPERFAMILY FAD/NAD(P)-binding domain 21 213 IPR036188 -
Vra5g1168 408 Gene3D - 20 391 IPR036188 -
Vra5g1168 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 19 41 - -
Vra5g1168 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 138 146 - -
Vra5g1168 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 201 - -
Vra5g1168 408 SUPERFAMILY FAD/NAD(P)-binding domain 179 391 IPR036188 -
Vra5g1168 408 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1168 Vra-Chr5 18116316 18118574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1168 K11816 - gmx:100789347 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1541 6 30511543 30514503 Vra5g1168 5 18116316 18118574 PCT