Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1527 ATGGAAAGCAGAACAGAGAACTCCAATGGCACTACAGTTCCCAAGCAATCAAAATCTCTGGATCTTAAAAGTCTATATAAATCACAATTGTCTCTAAAAACTTCAAAAAAGAACATAAAGAGGATTAACAGTAGTATTGGGGATGGTGATGAGAAGAGGAATAGAAAGAAGGCTAAAAGAGAAGTCTCTTTAAGTAGCTTAGAAAATGGTGATGGTAGCAGTGAGTTGAAGTTAGGGGTCAGTCAGAGATTTAATAGTAGTGTGTCAAATAAAGTTTCATTTGGAGTTTGTGGTGATGATTTTCACATTCCCAAGAGGAAGAGGAGTTTTATGCGGAAGAAAAAATCAGAGCCTGGTCAAGCATTAAATTTGGTGGAGCATCCCGATTGTAGAAGTGGCTATGTCCATCCTGTGCCAAATTTAGGTAGTGATGATGATTTGGGCAGTGGGGTTGAATCTTTCAAGACTAAGCATAAGAAAGAATTTGATGAATTTAATAAGGAAAATAGGAATAGTGATTCAAATTCAGTTCAAAATTTTAAGGAGAATGGGGATTGTGCATCTCATTCTCTTGTAAATATTGATGGTGGTGATTCTTCTTTGACAAAGTCACGAAGTAAGAATAGGAAACGTAAGACTTCAGCTTTAGATACAACTAAGGTTTCGAAGGAGGTTGAACCTTTGGTTTCGAGTTGTAAAATATCTGATGATTTGCAAGAAGATGAAGAGGAAAATCTTGAGGAGAATGCAGCTAGGATGCTATCTTCAAGGTTTGATCCAAGCTGTACTGGATTTTCGACCAAAGGTTCAAACGGTTTGTCATTTTTTCAATCTTCTAGTCAAAGTATTGTTAACCGTGATTTGAAGTTTCAATCAGGTTCAGAATCTGCATCAGCTGATACTGATGGCAGAGTTTTGAGGCCTAGGAAACAATATAAAAGCAAAGGTAATTCCAGGAAGAGGCGCCATTTTTATGAAATTCTTTTAGGTGATGTAGATGTATACTGGGTACTGAATCGGAGAATTAAAATTTTTTGGCCTTTAGACCAGAGATGGTATTATGGCCTTGTGGATGATTACGATGAAGGAAGCAAGCTTTACCATATCAAATATGATGATCGGGATGTAGAATGGGTTAATCTACATACTGAGAGATTTAAACTCTTGTTACTTCGTAGTGAAGTTCCAGGAAATGCAAAAGGTGAAAGAGCTTTTGCAAAACGTAGAAGTTCTGATCAACAGAAGGGTAGCAAATCCAGAAAAGAAAGGCAAAGAACAGAACACAATACTGAGAATGATCACCATGGTGGGAGCAGTATGGACTCAGAACCTATAATTTCATGGTTGGCTCGATCTTCTCATCGGTTTATATCTTCTTTTCAAGGCACTAAGAAACAGAAAACTTCTGTTACACTTCCAAGCACAACGTCATCATTCTTATATGACGAACCTGCCACAACAAAGGGACAATTATGTAAGCCTTCTTTGAAGGGTGTTGAAAATAATTTATTCAGTGATTATGGATCACAGGATAAATTAAGTGATGATTTTAGGATGAAGTCTTCATTGCAAAGTGCCACTTGCAATAAAGATGTAAAACAGCCTATTGTCTATTTCAGAAGGCGAATTCGAAAGCCAGCTCTAATACCCTCTCATATCCATGAAGAAAAGCATGCTATTAGAAGTGTATCTGGTTCTGTTTCCCTTGACCATATGTTTGGGGTTGAGAATATGAAGAATTCAAGTGATGACATGGATGAAGTTGAGGGCCCATTGTGCTTCACTTACAAGGCAGGAGTATCAAAAGTTTTTTGGGACATGGAATCATTGTTCAGATTTGGCTTAAATTTTCCAATGTGTTTCATGTTGAATAATCATTTTGAATCTGAAAATTTGTGGTTGCTTTATCCCCTTTTTTTGCTCCAGTATGGTACAGTTATGACCAAGTGGCCTAGAGTTTGTTTGGAGATGCTTTTTGTTGATAATGTGCTTGGGTTGAGATTTCTATTATTTGAAGGCTGCTTGAACATGGCTGTAGCCTTTGTCTTTTTTGTCCTTAGGGTATTTCACCAACCTGCCAGCCGAGGGAAGTATGTTGACTTGCAATTTCCATGTACATCTATTGGATTCAAGTTTTCTGGTCTTCATGTGATTAAGAAGCCGCTTGTTTTTGAGTTCTATAATTTCTCTGGAGTGAATAATTCTAAGTGGACGGACTTAGATTCAAAGCTTAAGAGGCATTGCCTTCTGAGTAAGAAGCTCCATCTTTCTGAATGCACATATGATAACATCCAGGCACTTCAAAATGGATCAAGTGGGTTGTCCACAACTTCTGTCAGTGGGTCCTCCGCAGTCAAGGTCATGCACAGGGGGAGGCCAGGGATTAACATCATGGGTATTTCCAAAGTGTCTACTCAAGCTGATATTCATCAGTATTCTGATGTTGGTGACAGGAAACTTCCTCCATTTACACTTTCTTTTGCTGCAGCACCTACATTTTTTCTTTCTTTCCATCTCAAGTTGCTGATGGAGCAGTCTGCAACTCATATTAGCTTTTCTGATCACACACCAGAATTTGATCAGGAAGACCCTAGTTTGGGGACCAATGGATGTACCAGCACCAATGGTTGCTCAAACAGGAATTCTGAAATTATCCCGAGGAAAGATATTGAGATCTTGTCCAATGGTGCTGCAGGTGATGGAGGGTCTTGTAATGACTCAGATCACCCCTTTACCTTCAATTATCAAATTCCCTCTCAAGAGTACCAGAACATTGGTCCTAGCAGTTTTGGTACTTCCAATTCTCATCGTTCCGAGAGGCTCGACACAACTCACTTACCTGAATGGCAATCACACCATATGGAGCAAGATATCCAAATTCCAGTTGATCAATTTGAGAAACCTGGTGGTGATGGTGATGGTGATTTACGTGATGCTGAACACTCTCCTGATATCTCTTGGAATGGAGGCGTCATGCCAAGCTCTAATTTAACTGCACTTAGAAGTTCTTGGTATCGGAACCCGAATAGTTCCTCATTATTGAGATTTCAGTCTCATGTGTGGTCTGATGGAAAGGCTGATTCACTTTACAATGATTTTAACAGTGGACCTAAGAAACCACGCACACAAGTATCATACTCAGTGCCTTCTGCTGGTTATGAATTCAGTTCAAGGCAGAGAAACCATCATCAGAAAGGGCTTCCTCACAAACGAATTAGAAAAGCCAGTGAGAAGAAGTCATCAGATGTTAGGGTCCCTGAAAAGAATTTTGAATGCTTATCTTGTGGTGCAAATGTCTTGATTACTCTTGGTGATAAGGGTTGGAGAGAATCTGGGGCCCATATTGTACTAGAGCTGTTTGACCACAATGAGTGGAGACTTTCTGTGAAACTTTTAGGAATTACTCGGTATTCATACAAAGCACATCAGTTTTTGCAGCCTGGATCAACAAATCGATACACACATGCAATGATGTGGAAAGGAGGGAAGGATTGGATCTTGGAATTTCCTGATAGGAGTCAGTGGACTCTTTTCAAGGAGATGCATGAGGAATGCTACAACCGTAACATCCGGGCTGCTTCAGTTAAAAATATACCTATTCCTGGTGTTCGTTTGATAGAAGAAAATGATGATAATGGATGTGAGGCAACTTTTGTTCGGAGCTTTATGTACTTCCAACAGGTTGAAACAGATGTTGAGATGGCTCTGGATCCATCCCGTGTTTTGTATGACATGGACAGCGAAGATGAGCGATGGATTGCCAATGCTCAAAATTCTGTAAAAGATAACAGTGACTCGAGTTGGATTTCAGAGGAGATGTTTGAGAAGACATTGGACATGTTTGAAAAGGTGGCATATACTAAGAAGCGTGACCAGTTTACTTCTAATGAGATAGAGGAACTCACGGTTGATGTTGGGCCTTTGTCTATTGTCAAAATCATATATGATCATTGGCAGGAGAGAAGGAAGAAGAGTGGAATGGCTTTAATACGGCAATTTCAGCCCCCTCTATGGGAAAGGTATCAGAAACAAGTGAGAGAGTGGGAGGTAGCCATGACAAAGAACAATACCCATTCCAATGCATGTGTGGACAAGGTTACAACTTTGGAGAAACCGGCCATGTTTGCTTTCTGTATGAAGCCTAGGGGTCTGGAATCCGTGAACAAGGGATTGAAGCATCGATCCCAAAAGAAGATTTCAGTATCTGGGCACGCAAACAGTAATCTAGATCAGGATGGCTTCCGAAGAAGATATAACGCCTTACCTTTTGGCGATGAAAAGTTCCTATACCAAGGCCATTATTACGATTCTTTTGATGAATCACCATTGCCTCTTACCTCACCAAGGATGTTCGTACCACGTGATGCTGGCAGCTTGAAATACCATCCTACCAGTAAAGGATCGGGTTACAGAAATCATGTCCCAAAATTTCACCAGTCTAGATATGATGTGCCTCATAACAGGCATCACCTGCTTGCTGGCCCCAAGAGGCAAGGTATTGAACAGTTGGATACTTCTGTCCTTGAGGAGTTAAGGCTACGAGATGCCGTGGCTGAGGCTCGTATTAAACGGCACATGGCTAAGTTGAAGAGAGATAGGGCTAAAAGATTGCTATATAAAGCAGATGTAGCAATTCACAAGTCCATTACAGCTCTAATGATTGCAGAAGCAATGAATGCTTCTTTGGACTCACTTGGTGAAATTAAAGCTTCGGAGTACTAA 4722 0.4019 MESRTENSNGTTVPKQSKSLDLKSLYKSQLSLKTSKKNIKRINSSIGDGDEKRNRKKAKREVSLSSLENGDGSSELKLGVSQRFNSSVSNKVSFGVCGDDFHIPKRKRSFMRKKKSEPGQALNLVEHPDCRSGYVHPVPNLGSDDDLGSGVESFKTKHKKEFDEFNKENRNSDSNSVQNFKENGDCASHSLVNIDGGDSSLTKSRSKNRKRKTSALDTTKVSKEVEPLVSSCKISDDLQEDEEENLEENAARMLSSRFDPSCTGFSTKGSNGLSFFQSSSQSIVNRDLKFQSGSESASADTDGRVLRPRKQYKSKGNSRKRRHFYEILLGDVDVYWVLNRRIKIFWPLDQRWYYGLVDDYDEGSKLYHIKYDDRDVEWVNLHTERFKLLLLRSEVPGNAKGERAFAKRRSSDQQKGSKSRKERQRTEHNTENDHHGGSSMDSEPIISWLARSSHRFISSFQGTKKQKTSVTLPSTTSSFLYDEPATTKGQLCKPSLKGVENNLFSDYGSQDKLSDDFRMKSSLQSATCNKDVKQPIVYFRRRIRKPALIPSHIHEEKHAIRSVSGSVSLDHMFGVENMKNSSDDMDEVEGPLCFTYKAGVSKVFWDMESLFRFGLNFPMCFMLNNHFESENLWLLYPLFLLQYGTVMTKWPRVCLEMLFVDNVLGLRFLLFEGCLNMAVAFVFFVLRVFHQPASRGKYVDLQFPCTSIGFKFSGLHVIKKPLVFEFYNFSGVNNSKWTDLDSKLKRHCLLSKKLHLSECTYDNIQALQNGSSGLSTTSVSGSSAVKVMHRGRPGINIMGISKVSTQADIHQYSDVGDRKLPPFTLSFAAAPTFFLSFHLKLLMEQSATHISFSDHTPEFDQEDPSLGTNGCTSTNGCSNRNSEIIPRKDIEILSNGAAGDGGSCNDSDHPFTFNYQIPSQEYQNIGPSSFGTSNSHRSERLDTTHLPEWQSHHMEQDIQIPVDQFEKPGGDGDGDLRDAEHSPDISWNGGVMPSSNLTALRSSWYRNPNSSSLLRFQSHVWSDGKADSLYNDFNSGPKKPRTQVSYSVPSAGYEFSSRQRNHHQKGLPHKRIRKASEKKSSDVRVPEKNFECLSCGANVLITLGDKGWRESGAHIVLELFDHNEWRLSVKLLGITRYSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWTLFKEMHEECYNRNIRAASVKNIPIPGVRLIEENDDNGCEATFVRSFMYFQQVETDVEMALDPSRVLYDMDSEDERWIANAQNSVKDNSDSSWISEEMFEKTLDMFEKVAYTKKRDQFTSNEIEELTVDVGPLSIVKIIYDHWQERRKKSGMALIRQFQPPLWERYQKQVREWEVAMTKNNTHSNACVDKVTTLEKPAMFAFCMKPRGLESVNKGLKHRSQKKISVSGHANSNLDQDGFRRRYNALPFGDEKFLYQGHYYDSFDESPLPLTSPRMFVPRDAGSLKYHPTSKGSGYRNHVPKFHQSRYDVPHNRHHLLAGPKRQGIEQLDTSVLEELRLRDAVAEARIKRHMAKLKRDRAKRLLYKADVAIHKSITALMIAEAMNASLDSLGEIKASEY* 1574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1527 1573 PANTHER PHD FINGER PROTEINS 2 1562 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 1 20 - -
Vra6g1527 1573 Gene3D - 339 384 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 293 314 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 43 64 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 36 75 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 965 990 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 160 221 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 1057 1080 - -
Vra6g1527 1573 SMART TUDOR_7 334 392 IPR002999 -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 968 982 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 401 442 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 401 438 - -
Vra6g1527 1573 Pfam Enhancer of polycomb-like 1191 1283 IPR019542 -
Vra6g1527 1573 PANTHER OS01G0179500 PROTEIN 2 1562 - -
Vra6g1527 1573 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1527 Vra-Chr6 30200831 30207561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1527 - - gmx:100792436 2369.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1527 6 30200831 30207561 Vra5g1138 5 17861329 17868070 PCT