Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1138 ATGGAAGATAGAGAGGAGAGCACCCATGGTACTGCAATTCCCAAAAAATCGAGATCTTTGGATCTGAAGAGTTTGTATAAACCAAAACTGAGAAAAGAGAGTCCAGAGAAGGGCTTAAAGAGGAAAGGGAGTCATCCTGGGGGCGTTTATGAGAATACGAACAAGAAAAAGAAGACCAGAAAAGAAGTGTCTCTAAGTAGCTTAGAGAATGCTGATGCTGGCAAGAAGAAGGTTGTCGATGAAGAATTTCAGAAAGGGCATGCTTCTGGCAGGCAGGAATTGTGCGAACAAAAGTTGGAGCCAAAGCAGGGATCAGGTATCAATACTTTGCTGAATAAAGGCTCGCTATGTTTTGATGAAAATGTTTACATTCCAAAGCGAAGGAGGGATTTTGTGGGGAGAAGGAAAATTGAAGTTGGCTTGGCTCCGAAGTTGGCTGGAGAGTCCAGTGATACAGGTGACCATGGTGATCAGATACTTAAGTTAAGTAGTGATGATTTGGACAGGGGGATTGAATCGTCAAAGATCAAACACAAACGAGATTTTGATGAGTTTAAGGGAACTAAGAGTAAATCTGCTGTAAAGAGTGGTGATTCCTCCTCAAAGAAGTCACTGAAGAAGGACAGAAAACTAAAGGCATTTGCTCCAGATAGAAATAGGGTTGCAACGGAGGTTAAGCCCCGTATTGATAGTAGTAAAACATCTGATTACAAGAAAAAGGCTGTGGCTCCGGATAGGGGCAGGGTTGCCAAGGAGGCTCGACCTGTGATTGATGATAGTAAAACATCTGACTACAAGCAAAAGTCTTTGGCTCCAGATAGAAATAAAGTTGCCAAAGAGGTTAAGCCTCTGATTGATGCTAATAAAATATCTGATTATATGCGGGAAGATGAGGAGGAGAATCTTGAAGAGAATGCAGCAAGGATGCTGTCTTCACGATTTGATCCAAATTATGCCGGATTTTGTTCAAGTAGTAAGCCCTCTACATTGCCATCATCAAATGGGTTGTCCTTTTTGATCTCTTCTAGTCGGAATATTGATAGTTGTGCGTCTAAGTCTCATTCAGGCTCAGAATCAGCATCAGTTGATACTGCTGGCAGAGTCTTGAGACCGAGGAAACAATACAACGAAAAAGGTCGTTCCCGCAAGAGGCGGCACTTTTATGAAATTTCATTAGGTGACTTAGATAAACATTGGATACTGAACCAGAGAATTAAGGTGTTTTGGCCTTTGGACCAAATTTGGTATCATGGTCTTGTCGATGATTATAACAAAGAAACAAAGTGTCATCATGTCAAATATGATGATCGAGAAGAAGAATGGATTAATCTCGAAACGGAGAGGTTCAAACTCCTGCTACTTCCAAGTGAAGTTCCTGGAAAAGCAGGGAAAAAAAGAGCAGTAAGGAAAAATAAAAGCTCTGGCCAGCAAAAGGGAAGCCTGTCCAGCAAAGAAAGGCAAATAAGAGATGTTATTACTGAGAATAATAGCTGTGTTGAAAGCTGTATGGACACAGAGCCTATAATCTCTTGGTTGGCTCGATCTTCCCATCGGTTTAAATCTTCTGCCTTTAACGGGGTTAAGAGAAAGAAAAATCCTATTACACTTCCAAGTACAGCCTCATCATTATGCAACGAAGCTGTAAAAACAGGGAGGCCCTTAGTTGAGAGTTCCCCGAGGGATGGGAAAAACAGCTTTTCCAGAGATTCTTTATCAGAAGATAAATTAGATGATAACTTTGGGGGTAAGTCTCCATTGCAAAGCTTCAATTGCCCTAAAGATGACAAACGACCTATTGTCTATTTTAGAAGGCGGTTTCGGAAGCCAACCCCAATGTTACCTCATATTTCTCTAAATAAACATGTTAACACAACTGCATCTTGTTCCATTTCTTTCGATCCTGAGGCTGATGGGCCTATGGATGTAAAAGGGTCCAATGCTGGGAGGGGTGAGATGGAGGGACCATTGTGTTACACACATAATGGGGGGGTTTTAAAAATTTTTTTGGAAACTGGTTCAGCAACATTCAAGTTTGGCTTAAAGTATCCAACACAATCTGTGTTGAATGGCTCGTTCAAATTAGAGAATTTGTGGTTGTTCCGTGCTATTCTGTTACTTCAGTATGGTACAGTTATGAGCCTGTGGCCAAGAGTTCATTTGGAGATGCTTTTTGTTGACAATGTGGCTGGACTGAGGTTTCTCTTATTTGAAGGCTGCTTGATGATGGCTGCAGCCTTTGTCTTTTGTGTCCTTCGGTTATTTCATCAACCTGCTGAACAGGGGAAGTATATTGACGTGCAGTTGCCTGCTACATCGATCCGATTCAGGTTTTCTAGTGTTTATGGTATAAGGAAGCCTCTTGTGTTCACTTTTTACAATTTCTCCAGAGTGAAGAATTCAAAATGGTTGTATTTAGATTCAAAACTTCAGAGACATTGCTTACTCGGTAAGCAGCTCCATCTCTCTGAATGCACATATGATAACATCCAGGCACTTCAAAATCAATCTAGTGACTATCCAATTACGTCCATCAGAGGGAACCCCTTAGTCAAGGTCATGCAGAAGAGGATTAGGCCAGGGATTAACATTATGGGTGTTTCCAGAGAGTTTTCTCAGGCTGATACCAGTGAATATTCTGACTCTGGCAAGAGGAAGATTCCTCCATTTTCACTTTCTTTTGCTGCTGCACCTACATTTTTTATTAGTTTACATCTGAAGTTGCTGATGGAAAAGTCAGTAGCTCATATTAGCTTTTGTGATCATGCACTGGTAGATGATGAGGAAGACTTTGGTCCGATGACAGATGACTGCTCTAGCATCGATGATTGCTCTAACCGTAATGCAGAATTTAATGTGAAGAAAAATATGATTACTTTGTCAAAGGATGCGGTGCCTGATGGATTGACTTGTGCCAAATCAGATTTATTAATTAGTCCATCTAATTGCAGTGATCAACTTCTCTCCCAAAATTACGAGAATATTGATCGTAGTGCCGATGGAACTTCCATGTTGGATTGTTCTGAGAGGCGTCGCAATGTTCAGTTATCAGACTGGCAAACATGTCACTTTGACCATTCTTTTCCTACAAATTCTTTATCTGATAAGATTAAAGCCAATGATGATTCTCATTCTTTCCTGTGCGATTTGAGTGTACAAATACCTTCTGTTGATCAATTTGAGAAACCTTGTGATGGTGATTTGCGTGATGCTCAACACTCTTCTGATTTTTCCTGGAATGCAAATGGAGGTGTCAGTCTCAGCCCCAACCCAACAGCTCCCAGAAGTTCTTGGCACCGGAACAGGAATAATTCCTCATCTTTTGGATTCCAGTCTCATGGGTGGTCTGATGTGAAGGGTGATTCTCTTCACAATGGTTTAAGCAGTGGACCTAAGAAACCAAGGACACAAGTACATTATTCAGTGCCTATTTCTGGGTATGATTACAATTCAAGGCACAGAAGCCATTATCAGAGACAGAGAGGGTTGCCTCACAAGCGAATTAGAAAGGCTAACGAGAAGAAATCATTGGATGTTGCTAGGAGTCCTGAAAAGAATCTGGAGGCCTTATCGTGTGGGGCTAATGTGTTGATTACCCTTGGTGATAAGGGGTGGAGAGAATCCGGTGCTCGAGTTGTACTAGAATTGTTTGATCACAACGAGTGGAAACTTTCTGTAAAACTTGCAGGCATTACAAGGTATTCTTACAAAGCACATCAGTTTCTGCAGACTGGATCAACAAATCGTTACACTCATGCTATGATGTGGAAAGGAGGGAAGGATTGGATCTTAGAATTTCCTGATCGGAGTCAGTGGGCTGTTTTCAAGGAGATGCACGAGGAATGCTACAACCAGAACATCCGTGCTGCTTCAGTTAAAAATATACCTATTCCTGGTGTTGTCTTGATAGAAGAAAATTATGATAATGAAGCTGAAGCTACTTTTGTTCGTGGCTCTAAATATTTTCGACAAGTTGAAACAGATGTAGAGATGGCTCTGAATCCATTGCATGTATTGTATGATTTGGATAGTGAAGATGAGCAGTGGATTTTGACTATTCAAAATTCTGAGAAAGATAATGGTTTCATGGATGGGATCTCCAATGAGATGTTTGAGAAAACAATGGACATGTTTGAGAAGGCTGCATATGCTCAGCAGCGTGATCATTTTACTCCAACTGAAATAGAGGAACTGACTGTTGATGTTGGGCCCTTCTGTGTAACCAAAATCATTTATGAATATTGGCAGCAGAAAAGGCAGAAGAAGGGAATGGCGTTAATACGACATTTTCAGCCACCTCTATGGGAAAGATATCAACATGAATTGAGGGAGTGGGAAGTTGCCGTGACGAAGAATAATATTCCCATTTCTAATGGGTGCTTGGACAAGGGTGTGGCTTTGGAGAAGCCAGCTATGTTTGCTTTCTGTTTGAAACCAAGAGGTTTGGAAGTACCAAACAAAGGATCAAAACATCGATCACAAAAGAAAATTTCGGTCTCAGGCCATTCAAACAATGTTCTGTATGAACAGGATGGATTCCATCCTTACGGACGAAGATTCAATGGGTTGGCATATGGTGATGAAAAGTTTGCATTCCCAGGGCATAATTATGATTCGGTGGATGATTCCCCATTGCCCCAAATCTCTCCGATATTCTCACCCCGAGACGTTGGCAGCATGGGATATTATTCTATAAACAACCGTTATGATAGAAATCATATACCCAAATATAACAGATACAAGTCAAGGAAATTTGGATCATTTGGGTTTCATAATGATTCCTATAATCAGAGAATTTCATCTTCAGGGAAGAGAAATGGGGATGCTAGGTGGAATGTGGGCTACTATGACTTGGCAGGCCACAGGCAGTACCTGTTGGATGGACCTCATAGACATGGGATCGATCAAACTGATGGTCCAGATCTCTATGAACTTAGAGTGCGTGATGCCTCGGGAGCTGCTCAGCATGCAGTTAACATAGCTAGAATGAAGAGAGAGAGAGCTCAGAGATTGCTTTACAGAGCGGATCTTGCAATTCACAAGGCTGTGGTTGCTCTTGTGACCGCTGAAGCAATGAAAGCTTCTGAAGATTCCAATGGTGATGGGTAG 5106 0.4142 MEDREESTHGTAIPKKSRSLDLKSLYKPKLRKESPEKGLKRKGSHPGGVYENTNKKKKTRKEVSLSSLENADAGKKKVVDEEFQKGHASGRQELCEQKLEPKQGSGINTLLNKGSLCFDENVYIPKRRRDFVGRRKIEVGLAPKLAGESSDTGDHGDQILKLSSDDLDRGIESSKIKHKRDFDEFKGTKSKSAVKSGDSSSKKSLKKDRKLKAFAPDRNRVATEVKPRIDSSKTSDYKKKAVAPDRGRVAKEARPVIDDSKTSDYKQKSLAPDRNKVAKEVKPLIDANKISDYMREDEEENLEENAARMLSSRFDPNYAGFCSSSKPSTLPSSNGLSFLISSSRNIDSCASKSHSGSESASVDTAGRVLRPRKQYNEKGRSRKRRHFYEISLGDLDKHWILNQRIKVFWPLDQIWYHGLVDDYNKETKCHHVKYDDREEEWINLETERFKLLLLPSEVPGKAGKKRAVRKNKSSGQQKGSLSSKERQIRDVITENNSCVESCMDTEPIISWLARSSHRFKSSAFNGVKRKKNPITLPSTASSLCNEAVKTGRPLVESSPRDGKNSFSRDSLSEDKLDDNFGGKSPLQSFNCPKDDKRPIVYFRRRFRKPTPMLPHISLNKHVNTTASCSISFDPEADGPMDVKGSNAGRGEMEGPLCYTHNGGVLKIFLETGSATFKFGLKYPTQSVLNGSFKLENLWLFRAILLLQYGTVMSLWPRVHLEMLFVDNVAGLRFLLFEGCLMMAAAFVFCVLRLFHQPAEQGKYIDVQLPATSIRFRFSSVYGIRKPLVFTFYNFSRVKNSKWLYLDSKLQRHCLLGKQLHLSECTYDNIQALQNQSSDYPITSIRGNPLVKVMQKRIRPGINIMGVSREFSQADTSEYSDSGKRKIPPFSLSFAAAPTFFISLHLKLLMEKSVAHISFCDHALVDDEEDFGPMTDDCSSIDDCSNRNAEFNVKKNMITLSKDAVPDGLTCAKSDLLISPSNCSDQLLSQNYENIDRSADGTSMLDCSERRRNVQLSDWQTCHFDHSFPTNSLSDKIKANDDSHSFLCDLSVQIPSVDQFEKPCDGDLRDAQHSSDFSWNANGGVSLSPNPTAPRSSWHRNRNNSSSFGFQSHGWSDVKGDSLHNGLSSGPKKPRTQVHYSVPISGYDYNSRHRSHYQRQRGLPHKRIRKANEKKSLDVARSPEKNLEALSCGANVLITLGDKGWRESGARVVLELFDHNEWKLSVKLAGITRYSYKAHQFLQTGSTNRYTHAMMWKGGKDWILEFPDRSQWAVFKEMHEECYNQNIRAASVKNIPIPGVVLIEENYDNEAEATFVRGSKYFRQVETDVEMALNPLHVLYDLDSEDEQWILTIQNSEKDNGFMDGISNEMFEKTMDMFEKAAYAQQRDHFTPTEIEELTVDVGPFCVTKIIYEYWQQKRQKKGMALIRHFQPPLWERYQHELREWEVAVTKNNIPISNGCLDKGVALEKPAMFAFCLKPRGLEVPNKGSKHRSQKKISVSGHSNNVLYEQDGFHPYGRRFNGLAYGDEKFAFPGHNYDSVDDSPLPQISPIFSPRDVGSMGYYSINNRYDRNHIPKYNRYKSRKFGSFGFHNDSYNQRISSSGKRNGDARWNVGYYDLAGHRQYLLDGPHRHGIDQTDGPDLYELRVRDASGAAQHAVNIARMKRERAQRLLYRADLAIHKAVVALVTAEAMKASEDSNGDG* 1702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1138 1701 SMART TUDOR_7 397 455 IPR002999 -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 562 580 - -
Vra5g1138 1701 Pfam Enhancer of polycomb-like 1285 1379 IPR019542 -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 550 590 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 142 164 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 178 274 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 200 274 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 20 44 - -
Vra5g1138 1701 PANTHER OS01G0179500 PROTEIN 2 1700 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 462 486 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 1 77 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 1078 1103 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 350 380 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 51 65 - -
Vra5g1138 1701 MobiDBLite consensus disorder prediction 150 164 - -
Vra5g1138 1701 PANTHER PHD FINGER PROTEINS 2 1700 - -
Vra5g1138 1701 Gene3D - 398 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1138 Vra-Chr5 17861329 17868070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1138 - - vun:114163981 3232.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1527 6 30200831 30207561 Vra5g1138 5 17861329 17868070 PCT