Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1521 ATGCTGAGGAAGAGAAACGGGTCAATCCTGAAAGATCAACACAAAGCTGGCAAGATGGTAATTTCTGAAGCCAATTTTGAGTCATATTCTCAGTCTCATGCTTTGGGGAGCAATGTCAAAAGCAACTCAATTTTCAATGCCCCTCTTCTGTTTGTGGGAATGGGTCCTAAAGGCTTGTTGGATTCTGATTCAGTTAAGAGTCCCACTTCTCCACTAGATGTTTCATTCTTTTCAAATTTAAGTAATCCCTTCAGAACCCTAAGTTCATTGTCCAATGAGGGGCAACAAAGGAGCTGGGACTGTGCCAAAGTAGGTCTAAGTATTATAGATTCTTTGGAAGAATGTTCCAAGTTTTCTAGAAAAATTCTCCAAGCATCGGAGAGCAAGAAGACTGGTCTGAGTCCCCAAATGATTACTAAAGCCCCAAATTGTAAACCCTATATGGATATGGATTATGCTCAGGCATCTAAGTCTTTACCCAAAGATTTTTGCAAGATCCATTGTACTCAAAATGGTTATATTTTCCCAAAGGGTGAGTCCACTGTTCTTTTTGAGATTGGAGAGACCCCACCACAACATGAGTCCTTTGAGAAAACTGTGTCTGTCTCATTGGACTCTTGCAGTCCTATTAGGAATCTGTCTGTTTTAACTGGTCCCAACTTTGATTCTGACCCTGAGAATCTTGCTTTGAAACACAAGTGCTCTCCTCCTCATTTTATTGGAGGAAGCCATGATAACACACAAGTTTTGCTACCTGCTGACTTAAATTCAAACCCTGTGGCTGCAGTATCTTCTAAGGAATTTATTAAGTCTCTATCGGCCAGTGAGATTGAACTCTCTGAGGATTATACCTGTGTGATATCTCATGGTCCTAATCCTAAAACAACACATATTTTCTGCGACTGCATTTTGGAAACTCATGCAACTGATGTTGGAAAACATAACAAGAATGGAGAGGATGGAAAGGAATCATCTCTTTTCAGTGTTAACAGCATGCATATTCCAAACCATTTTCCATCTGAAGACTTCTTAAGTTTCTGTCACCATTGTAACAAGAAGTTGGAAGAGGGAAAAGACATTTACATCTATAGAGGTGAAAAAGCATTTTGCAGTTTGAGCTGCCGGGAAGTAGAGATCATGCTTGATGAGGAGCTAGAAAAATCTGATTCATCACCTGAAAATTCTCACTAG 1191 0.3988 MLRKRNGSILKDQHKAGKMVISEANFESYSQSHALGSNVKSNSIFNAPLLFVGMGPKGLLDSDSVKSPTSPLDVSFFSNLSNPFRTLSSLSNEGQQRSWDCAKVGLSIIDSLEECSKFSRKILQASESKKTGLSPQMITKAPNCKPYMDMDYAQASKSLPKDFCKIHCTQNGYIFPKGESTVLFEIGETPPQHESFEKTVSVSLDSCSPIRNLSVLTGPNFDSDPENLALKHKCSPPHFIGGSHDNTQVLLPADLNSNPVAAVSSKEFIKSLSASEIELSEDYTCVISHGPNPKTTHIFCDCILETHATDVGKHNKNGEDGKESSLFSVNSMHIPNHFPSEDFLSFCHHCNKKLEEGKDIYIYRGEKAFCSLSCREVEIMLDEELEKSDSSPENSH* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1521 396 Pfam zinc-finger of the FCS-type, C2-C2 338 384 IPR007650 -
Vra6g1521 396 ProSiteProfiles Zinc finger FLZ-type profile. 342 386 IPR007650 -
Vra6g1521 396 PANTHER FCS-LIKE ZINC FINGER 11 1 395 IPR044585 -
Vra6g1521 396 PANTHER DUF581 FAMILY PROTEIN 1 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1521 Vra-Chr6 30109634 30112362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1521 - - gmx:100804101 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1521 6 30109634 30112362 Vra5g1134 5 17825710 17827240 PCT