Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1134 ATGCTGAGGAAGAGGAATAGGTCCGTGCAGAAGGAACAACACCACATGAGTAATCTGACACAGTGTGAAGCCAATTCAGAGCACTATTCGCAGACTCATCATGGTTTGGGACGCAACAACATCAAGCGACACTCAATTTTCAATGTTCCTTGTCTGTTTGTGGGTCTAGGTCCGAAAGGGTTGTTGGATTCTGATTCAGTTAGGAGCCCCACTTCTCCACTTGATGCTAGAGTTCTTTCAAATCTAGGCAACCCTGTTAGGAAGCCAAGATCTTCAACTCATGAAGGGCACCCAAGGAGTTGGGATTGTTGCAAAGTAGGTCTAGGCATTGTGGAGTCTTTGGAAGACTGTTCTAGGTTTTCTGGGAAAATTCTGCAGTCACCAGAGAGCAAGAGGGTTAGTCTGAGTCCTCAAGTGATGATCAAAGCCCCAAATTGTCAAATCCATAGGGATTTTCTTGAGGGATCCAAGTCTTTGCCCAAAGATTTTTGTAAGGCTCCTTATGCCCCTAAAAATGGATCTGTTACCCACAAGGGTGAATCTGAGTCCACTGTTCTTTTTGAGATTGGAGAAAGTGGGCTTGAGCATGAACTGTTTGGGAGAACCAGAACCAGGTCTTGTTCATTGGACTCTTGCAGTCCACTGAAAGAGCTTTCTGGCTTAAACACTTCCTTCTCTGATTCAGACACTGAAAATTTTGCTGTGAAAGATGTCAACATTCAATTGTGCTCTCCTCCTCATTTTATTGGGGGAAGCCAGTGCTCAAATACCTTCCCCCCACCTACAAAGTTGAACACAAACCCTCTTTCCATTAGCTCTTCCAATGAATTTATCAACTCTCTGTCTGCTACTGAGATTGAACTCTCTGAGGACTACACATGTGTGATTTCCTACGGCCCTAATCCCAAAACAACTCACATTTTTGGGGATTGCATTCTGGAGACTCATTCCAATGCATTCAAAATCCATGAAGAGAAGAAGGTAGTGAACACTGTTGCTAACAGGTCAGGGACTCCAAACCCATATCCCTCAAGCGACTTCTTGAGTTTCTGCCACCATTGCAACAAGAAACTAGAAGAGGGGAAGGACATTTATATTTATGGGGGTGAAAAGGCATTCTGCAGTTTAACTTGTCGTGCCATGGAGATCATGATTGATGAGGAACTAGAGAAATCCAACACCGACCCTCCTTGTGAAAACTCTGCAAAGCCAAAACTTGGTGAGCTACTTTTTGAAACAGGCATTCTCACAGCTTCATAG 1260 0.4405 MLRKRNRSVQKEQHHMSNLTQCEANSEHYSQTHHGLGRNNIKRHSIFNVPCLFVGLGPKGLLDSDSVRSPTSPLDARVLSNLGNPVRKPRSSTHEGHPRSWDCCKVGLGIVESLEDCSRFSGKILQSPESKRVSLSPQVMIKAPNCQIHRDFLEGSKSLPKDFCKAPYAPKNGSVTHKGESESTVLFEIGESGLEHELFGRTRTRSCSLDSCSPLKELSGLNTSFSDSDTENFAVKDVNIQLCSPPHFIGGSQCSNTFPPPTKLNTNPLSISSSNEFINSLSATEIELSEDYTCVISYGPNPKTTHIFGDCILETHSNAFKIHEEKKVVNTVANRSGTPNPYPSSDFLSFCHHCNKKLEEGKDIYIYGGEKAFCSLTCRAMEIMIDEELEKSNTDPPCENSAKPKLGELLFETGILTAS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1134 419 MobiDBLite consensus disorder prediction 66 98 - -
Vra5g1134 419 MobiDBLite consensus disorder prediction 1 24 - -
Vra5g1134 419 PANTHER DUF581 FAMILY PROTEIN 1 413 - -
Vra5g1134 419 PANTHER FCS-LIKE ZINC FINGER 11 1 413 IPR044585 -
Vra5g1134 419 Pfam zinc-finger of the FCS-type, C2-C2 341 388 IPR007650 -
Vra5g1134 419 ProSiteProfiles Zinc finger FLZ-type profile. 346 390 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1134 Vra-Chr5 17825710 17827240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1134 - - gmx:100779553 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1521 6 30109634 30112362 Vra5g1134 5 17825710 17827240 PCT