Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1508 ATGGGGGATGAGAAAGCTGAGAAGAAAGAAAGTAGTGCGGTGAAGGAGAATATCGAGAACAATGGGGAGAAGACGAAGGAAGAGAAGAAGACAAAGAAGAAGGGGTTTATTTCGCGAATATGGAACGCGATATTCAGGTCCAACAACGACGATTTCGAGAAGAGGCTTCAGTATATCACCAAAGAAGAAAACGCCGTCGTTGTGAGAATGAGCAACAGATCTCGCTCTTGGAGGCGAACCTCTCGCCAGCTTATTTTATTTTCCGTTCTGTTCGAGGTCATTGCTGTAGGTTATGCTATTATGACGACAAGATCAATGGATATGAATTGGAAAATGCGGGCAATTCGAGTGTTGCCAATGTTTCTTTTGCCTGCCTTGTCAACCGCTACATATTCAACATTTGTCAGCTTCACAAGGATGTGTGATCGCAAGGACCAGAAAATTCTTGAGAGGCTTAGAGCTGAAAGGAAAGCGAAAATTGATGAGCTCAAAGAGAAGACAAACTATTACATTACTCAGCAACTCATTCAGAGATATGACACGGATCCAGCAGCAAAAGCAGCAGCTGCAACTGTTTTAGCATCTAAGTTGGGTTCAGATTCTGGTTTGAACGTGTATGTGGAAGATCAATCTTCTGCTGCTCCAACTGGGAAGACCAAGGATGTTGAAGTTGTGCAGTCAAGTGGTCTTCGAAATCGCAAGCAAGTGAACTCTAGATCCACTAGTCCGGCGACAAAGACAACAAATTATTCTGATGAACAATTAGTTGGTTCTGGGAAAATTAATCAAACTCAAACTCCTGAGCATAATGAGCTTGTTGTTGTTGAACATCATCCTCAAAGTTCAGCAATGAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTTGTGGGTGAGGATCCAACCCAGTCTTATGCACTCATATGTGGTAATTGCCATATGCATAATGGCCTTTCTCGGAAGGAGGACTTCCCATTCATTACTTATTACTGCCCACACTGTCACGCCTTGAACAAACCAAAGCATTCGGATGAGCATATATCTCTACCAAACACTGATTCTCCAAAAGCAGATGATGGCAAAGAAGTCCAAAAAGCTGGTGCTTCTGACAGCTTAATCGCAAGCGACAATCCTGTAAAAGCGACCCCTGAGATTGAGGAAGTAGCTGACCGGGCTATTTCAGGTGATGAAAGCTAG 1200 0.4342 MGDEKAEKKESSAVKENIENNGEKTKEEKKTKKKGFISRIWNAIFRSNNDDFEKRLQYITKEENAVVVRMSNRSRSWRRTSRQLILFSVLFEVIAVGYAIMTTRSMDMNWKMRAIRVLPMFLLPALSTATYSTFVSFTRMCDRKDQKILERLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGSDSGLNVYVEDQSSAAPTGKTKDVEVVQSSGLRNRKQVNSRSTSPATKTTNYSDEQLVGSGKINQTQTPEHNELVVVEHHPQSSAMNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLSRKEDFPFITYYCPHCHALNKPKHSDEHISLPNTDSPKADDGKEVQKAGASDSLIASDNPVKATPEIEEVADRAISGDES* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1508 399 MobiDBLite consensus disorder prediction 384 399 - -
Vra6g1508 399 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 289 339 IPR019273 -
Vra6g1508 399 MobiDBLite consensus disorder prediction 1 30 - -
Vra6g1508 399 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 18 394 IPR040115 GO:0071786
Vra6g1508 399 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 18 394 - -
Vra6g1508 399 MobiDBLite consensus disorder prediction 343 399 - -
Vra6g1508 399 Coils Coil 146 169 - -
Vra6g1508 399 MobiDBLite consensus disorder prediction 210 253 - -
Vra6g1508 399 MobiDBLite consensus disorder prediction 343 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1508 Vra-Chr6 29933001 29937750 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1508 K23292 - gmx:100815496 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1508 6 29933001 29937750 Vra5g1124 5 17694551 17698507 PCT