Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1491 ATGCAACCCCCACTCAGTTCAAGAATCAATTTGGTGGAATTAAAAGCGCAGATTGTAAAGAGGATTGGAGCGGAGAAGTCAAAGCAGTACTTTTATTACTTGAACAGGTTTCTGAGTCAGAAGCTGAGCAAGACTGAATTTGATAGGTCATGTTATCGGGTACTTGGCAGGGAGAATCTTCCGTTACACAATCACTTCATAAAGTCAATTTTGAAAAATGCTTGCCAAGCCAAGACCCCACCGCCAGTCCAGCAACTGACAGGTCCTCCAAAAACTGGAACACTTGTCAGTCATGGATCTGGTCGAGATGATGGACATGAACATAGTTTTGTTAACGTCCAAAATCAGAATGTTTCCATTTGGTCCAATGGGGTTGTGCCTGTTTCGCCACGCAAGTTAAGGTCTGGCGGCCGTGATCGTAAGCTTAAAGATAGACTGAGCCCTCTTGGACCAAATGGAAAAGTTGATTCTGTTGCTCATCAATCCACAGCTACAGAAGACAGCAGTAGTAAGGTTGATATGGAGAATGATATTCTTACTCCATGTGATTATCAAAGACCTACACAACATCTTCATGTAGTTGATGAGCTACTTGAGAATGGTATGGTTGATGCTCTTCAGAGACCTGGTGAGAAACCAAGAATACATGGGAAAGGACCAACCGATGTATCAGTTACTGAAAATGGGGAAGAGGTGGAGCAATTAGGCCGCCTAAATTTTTCTACAAGTCCCTTGGTAGCACCACTTGGGATTCCCTACTGCACCACAAGTGTTGGTGGGGCCCGCAAAGCGTTGCCATTGAATGGCACTATTGATTTTGTTAGTTTTTGCGACAGTGGTAGGTTATCTAATACAGATACATTGAGAAGGCGCATGGAGCAGATTGCCACAGTTCAGGGTCTTGGAGGTGTTTCTATGGAATGTGCAAATACATTGAATAATATGTTAGATGTGTACTTGAAAAGGTTGATCAGATCTTGTGTTAATTTAGTGGGAGCTAGGTCTGCAAATGAACATAGGAAGCTCCCTGTCTCGAAACAGCAGATTCAGGGGAAGGTCGTTAATGGTGTCTGGCCAAATAATCATTCACATGTGCATAGTGGGCTGACAGAATCTGATGCTGGACACGGACCACCACACTTGATATCTTTGCATGATTTTAAAGTTGCTATGGAGCTAAATCCACAGCTACTTGGAGAGGATTGGCCGGTACAATTGGAGAAAATTTCTATGCGATCATTTGAGGAATGA 1251 0.4325 MQPPLSSRINLVELKAQIVKRIGAEKSKQYFYYLNRFLSQKLSKTEFDRSCYRVLGRENLPLHNHFIKSILKNACQAKTPPPVQQLTGPPKTGTLVSHGSGRDDGHEHSFVNVQNQNVSIWSNGVVPVSPRKLRSGGRDRKLKDRLSPLGPNGKVDSVAHQSTATEDSSSKVDMENDILTPCDYQRPTQHLHVVDELLENGMVDALQRPGEKPRIHGKGPTDVSVTENGEEVEQLGRLNFSTSPLVAPLGIPYCTTSVGGARKALPLNGTIDFVSFCDSGRLSNTDTLRRRMEQIATVQGLGGVSMECANTLNNMLDVYLKRLIRSCVNLVGARSANEHRKLPVSKQQIQGKVVNGVWPNNHSHVHSGLTESDAGHGPPHLISLHDFKVAMELNPQLLGEDWPVQLEKISMRSFEE* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1491 416 MobiDBLite consensus disorder prediction 133 147 - -
Vra6g1491 416 MobiDBLite consensus disorder prediction 129 172 - -
Vra6g1491 416 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 416 - -
Vra6g1491 416 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 416 IPR024738 GO:0070461
Vra6g1491 416 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 331 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1491 Vra-Chr6 29633936 29636606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1491 - - gmx:100811524 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1491 6 29633936 29636606 Vra5g1114 5 17582683 17585537 PCT