Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1114 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAATTGAAAGCACAGATTGTAAAGAAGCTTGGAGCGGATAAGTCAAAGCGGTACTTTTATTGCTTGAACAGGTTTTTGAGTCAGAAACTGAGCAAGACTGAGTTTGATAAGTTTTGTTTCCGAGTGCTTGGGAGGGAGAATCTTCCATTGCACAACCATTTTATAAAGTCAATTTTGAAGAATGCGTGCCAAGCCAAGATCCCACCACCAATCCATCCGTCAGGTCCCCAGAAGTTTGGAGAACATGCTTCAGACATATCTCCTGGCAGAGAAGATGGGCACGAACAGAGTGTTGGCAGCTTCCACAATCAGAATCAAAAGGCTCCCGTTTGGTCAAATGGGATTTTGCCGGTATCCCCTAAGGTTAGGCCTGGCATACGTGAGCGGAAGCTGAGGGATAGACCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTTTCTCATCAATCCATGGGTACAGAAGATTGTGGTAGTAAGGTTGATATGGAGAATGGAATCCTTACTCCTAGTGATTATCAGACACCCATGCAGCATCTTCAAGCTGTTGCTGAGCTACCTGAGTATGAAAAAGGAGATCCTGATCGGCGACCTGTAGAAAAGCCAAGAATACACGGGAAAGGGCCAGCTGAAATGTCAATTGTTGAAGAGGGGGAAGAAGTGGATCAGTTAAATCGCTTCGGTCTTTCTAAAAGTCCCTTGATAGCACCACTTGGGATTCCTTACTGCTCAGCAAGTGTAGGAGGAGCCCGCAAGGCATTGCCAGTGAGTAGTGCTGGCTATTTTGACAGTTGTTGTGACAGTGGCAGGTTGTCTGATACAGAAACACTCAGGAGGCGCATGGATCAGATTGCTGCAGTACAAGGTCTTGGAGCCATTTCTATGGAATGTGCAAACATGTTGAATAATATGTTGGATGTCTACTTGAAACGGTTGATCAGGTCTTGTGTTGATTTAGTTAGAGCTAGGTCTACAAATGAGCCGAGGAAGACCCCTGCCCCCAGACAGCAGATGCAGGGTAAGGTCATCAATGGCATGTGGCCAAACAATCATTTACACGTGCAGTGTGATGGTGCGTCAGCAGAAGCTGTGTCAGAACATAGACCACCATGCTTAGTTTCTTTGCATGACTTTAAAGTTGCCATGGAACTAAATCCACAGCAACTCGGAGAAGATTGGCCACTGTGGTTGGAAAAAATATCCATGCAATCGTTTGAAGAATAA 1260 0.4563 MQPQQSSRIDLGELKAQIVKKLGADKSKRYFYCLNRFLSQKLSKTEFDKFCFRVLGRENLPLHNHFIKSILKNACQAKIPPPIHPSGPQKFGEHASDISPGREDGHEQSVGSFHNQNQKAPVWSNGILPVSPKVRPGIRERKLRDRPSPLGPNGKVDSVSHQSMGTEDCGSKVDMENGILTPSDYQTPMQHLQAVAELPEYEKGDPDRRPVEKPRIHGKGPAEMSIVEEGEEVDQLNRFGLSKSPLIAPLGIPYCSASVGGARKALPVSSAGYFDSCCDSGRLSDTETLRRRMDQIAAVQGLGAISMECANMLNNMLDVYLKRLIRSCVDLVRARSTNEPRKTPAPRQQMQGKVINGMWPNNHLHVQCDGASAEAVSEHRPPCLVSLHDFKVAMELNPQQLGEDWPLWLEKISMQSFEE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1114 419 MobiDBLite consensus disorder prediction 110 124 - -
Vra5g1114 419 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 419 IPR024738 GO:0070461
Vra5g1114 419 MobiDBLite consensus disorder prediction 199 218 - -
Vra5g1114 419 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 419 - -
Vra5g1114 419 MobiDBLite consensus disorder prediction 82 168 - -
Vra5g1114 419 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 332 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1114 Vra-Chr5 17582683 17585537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1114 - - gmx:100819343 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1491 6 29633936 29636606 Vra5g1114 5 17582683 17585537 PCT