Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1398 ATGGCGGAGGATACGGCTCCTCTTGGCGGCGGCGATTCGTCGTCGGCGGCGAGGGCTCCGTCATCCTTCGTGAAGAAAGGTGACAGGCAAATGTTCACAGTGGAGCTTCGACCGGGAGAGACCACCATAGTGTCCTGGAAGAAGCTGATGAAAGACACCAATAAGGTTAACAATAAGGGACCCGCTTCCGCACCAGAGCACCTGCCCAATGGGAACCCTGTGCTCGAGTCCAGAATCGCTCCGGGACAACCTAAGAAGACTGAAGAACAAGGTGCTCCTCAGCCAAATCGTTTCAGTGCTGTAATAGAAAAGATTGAACGCCTTTACATGGGTAAGGATAGTAGTGATGAGGAGGATCTACTTGATGTTCCTGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCTGAATTGGATGAGTATTTTGAGGTTGATAACTCTGCAATCAAGCATGATGGGTTCTTTGTAAATAGGGGGAAATTGGAACGCATAAATGAACCTCCAGCATTACCAATCCAGCAAGCAAAGAAAAGGCGCCGAAAAGATATATCAAAGAATCCTGGAGAAAATATTGATGGTCATGTATCAAATAAACTTGTGAAAGTGGGCAAGAGTGCCGTTGTGAAGACTGCATCATTACCTGTGAAAAATATGCTCAGTTCCTCAAATAATGTTGGCGTACCTAGTGAACATTATGAAGACCTGAAATTTCAGAAGCAAATGGATGTCTCTGGAATTAGTTTGAAAAAGAAAANTGCTGATGCTACACCAGTTTCGGACCCCCCTGTCTGTTCAAAAGTATCAAATAATGATCCTCTTGATGCAGAAGGTGCTGATAAACAGAAGACTGAAGTGTCTCAATCTAAGAACACGGGTGATAAATTTAAAGATGCAGGTGGATTGGTTGATACTTCTGATCATAAGTACCATGAAAAAAATTTATCTGCACATTCAAAATCCCAACCTGGGAAATCCTCAAGTAGTCTTGACAATGTAGAAAACACAGGTCGGTCAAAAGATAAAAATTGCATCCGGGAACTGCCAGATCTAAACTTGTCTGTGGGAAAAATTGCTATACGTGCACCAAAATCTGAACATGTGCTCAAGAAAGATGGTTCTAGTGCTAGGCCAAAAATTACAACACTTGAGAAAGCTATTCGAGATTTGGAGAAGATAGTCACGGAATCAAGGCCACCAACTATGGAAAACCAGGAGGGTGATAACACACCTCAGGCTGTCAAACGGAGATTGCCTAGAGACATAAAGCTGAAACTTGCTAAAGTGGCTAGATTAGCAGCAAGCCAAGGGAAAGTATCAAAGGATTTAATTAACCGTCTTATGAGTATTCTTGGGCATTTGATTCAACTTAGAACTCTAAAGAGAAACTTAAAAATTATGATCAGTATGGGTTTGTCTGCAAAGCAGGAGAAAGATGATAGGTTTCAACAGATAAAGAAGGAAGTTGTTCAGATGATTAAGATGCAGGCCCCACCCATGGAATCGAAGTTACAGCAGCAAGCTGGAGCATCTGGGGAAAAAGAAATGGGTCCTGATGGAAAAGCAACAACTAAAAAGATTTTTTGTATGGACACTGCATTGGAAGACAGGATTTGTGATCTCTATGACCTTTTCGTTGATGGTTTAGATGAAAATGCCGGTCCTCAAATCAGAAAGTTGTATGCTGAGCTTGCAGAATTATGGCCAACTGGTTACATGGACAACCATGGGATCAAGCGTGCAATTTGCAGGTCAAAGGAGAGGCGCCGAGCACTGCACATCAGACATAAGGATCGGGAGAAAATTAAGAAGAAAAAGTTATTTGCACCTAGACAAGATGAGAATGCTCGATTCGATGCTAATCCAATTACTTCGCAACAGCCCATGCGAGAGAGATTAGCTACAGACTCTAGCAGTTTTAATCACATTTCAGTAAACAAGGCAGTTTCTAATACAATTGCTGCTCCACGGATTTACAATCCTTCTTTGAATGGTTCAAAACAAGAAAAAGCAAAGGGAAGTTCTAGTGGTTCTCTGGATGATGACGGGGATGAAGATGTTTTAGTAAAGAAGAGAGTAAAGAGAAGGCCTGAACAGGGTTTAGAAGGAAATCATTTTCGCCCTGGGAAGATGACGGCTTTTACACGAGTTGACAAGACTAGGTCTCTAAAGCAGTCTGCGGGTGTTCTCCCCAAATCAAACATTCAGCCAAGTTCTCTCCATGGTCTTGAGCAGTCAAGCTAA 2247 0.4237 MAEDTAPLGGGDSSSAARAPSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDTNKVNNKGPASAPEHLPNGNPVLESRIAPGQPKKTEEQGAPQPNRFSAVIEKIERLYMGKDSSDEEDLLDVPDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPPALPIQQAKKRRRKDISKNPGENIDGHVSNKLVKVGKSAVVKTASLPVKNMLSSSNNVGVPSEHYEDLKFQKQMDVSGISLKKKXADATPVSDPPVCSKVSNNDPLDAEGADKQKTEVSQSKNTGDKFKDAGGLVDTSDHKYHEKNLSAHSKSQPGKSSSSLDNVENTGRSKDKNCIRELPDLNLSVGKIAIRAPKSEHVLKKDGSSARPKITTLEKAIRDLEKIVTESRPPTMENQEGDNTPQAVKRRLPRDIKLKLAKVARLAASQGKVSKDLINRLMSILGHLIQLRTLKRNLKIMISMGLSAKQEKDDRFQQIKKEVVQMIKMQAPPMESKLQQQAGASGEKEMGPDGKATTKKIFCMDTALEDRICDLYDLFVDGLDENAGPQIRKLYAELAELWPTGYMDNHGIKRAICRSKERRRALHIRHKDREKIKKKKLFAPRQDENARFDANPITSQQPMRERLATDSSSFNHISVNKAVSNTIAAPRIYNPSLNGSKQEKAKGSSSGSLDDDGDEDVLVKKRVKRRPEQGLEGNHFRPGKMTAFTRVDKTRSLKQSAGVLPKSNIQPSSLHGLEQSS* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1398 748 MobiDBLite consensus disorder prediction 113 132 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 614 639 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 51 99 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 659 748 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 254 344 - -
Vra6g1398 748 Pfam HPC2 and ubinuclein domain 125 164 IPR014840 -
Vra6g1398 748 MobiDBLite consensus disorder prediction 301 319 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 619 639 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 168 197 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 320 335 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 659 674 - -
Vra6g1398 748 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 17 748 - -
Vra6g1398 748 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 17 748 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 118 132 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 502 522 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 719 748 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 275 293 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 675 704 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 175 190 - -
Vra6g1398 748 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1398 Vra-Chr6 27458227 27475961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1398 - - gmx:100799794 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1398 6 27458227 27475961 Vra6g1398 6 27458227 27475961 ECH
Vra6g1398 6 27458227 27475961 Vra5g0748 5 12750917 12762047 PCT