Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0748 ATGGCGGAGGAGAAGAGGGCGTCGTCGTCGTTCGTGAAGAAAGGTGACCGGCAAATGTTCACGGTGGAGCTCCGGCCTGGCGAGACGACCATAGTTTCGTGGAAGAAGCTGATGAAGGACTCTAGCAAGCCTAACGGATCCAATTCGGCACCGCAACAAGTCGCAATCGCTCCGGGTGAACCTGTTGATGTTGAAGAAAATGATCCCTCTCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGCAAGGATAGTAGCGATGATGAGGATCTGCTTGATGTTCCTGATGATGATCAATATGATACTGAAGACTCTTTTATAGATGATGCTGAACTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGGTTCTTTGTAAATAGGGGGAAACTAGAACGCATAAATGAACCTGCTGCACTACCTAACCAGCAACCAAAGAAAAGGCGCAGAAAAGATATAATGAAGAATGGTGAAAACAATGATGGTCATGGATCAAATAAAAATGCAAAAGTTGGCAGGCCAGCATCTGGCAAAACAGCTTCACTGCATGCAAAAAATATGTTAAATATATCTGAGAATTTGGTTGCACCTGATGAACATTATGAAGACTTGAAACTTTCAAATCAGTCAGATGTCTCTGGAATTATTTCGAAAAAGAAAACTGTTGATACTAAACCGACATTGGACCCTTCCATCTCTTTGAAAACATCAAATGATGATGTTACTGGTGTAACAGATGCAAAAGATGCTGACAAGCAAAGGATAGGAGTTTTTCAATCTAAGAACATTAGTGATAAATGTAAAGATGGAAGTGGATCATTTGATGCATCTCATCAGAAGTACAATGAGAAAAGTGCTTATGCACATTCCAAATCCCAACCTGGAAGACCCCCAAATAGTATTGATGATTTGGAAAATATTATTAGGACAAAAGAAAAAAGTGGTATGTGTGAACTGCCAGATCTAAACCTGTCTGAGGCGAAGTCTGCTACCCAAGCAACAAAATCTGAAAACATGCAGAAGAAAGAGGGTTCTAGTGTTAGGCCAAAAACTTCAATGCTTGAAAAGGCTCTTCGTGAGTTGGAAAAAATGGTTGCAGAATCCAGGCCACCAGCAGTGGACAACCAGGATGCTGTCAAAAGGAGGTTGCCTAGAGAAATAAAGCTAAAGCTTGCTAAAGTTGCTAGACTGGCGGCAACCCATGGGAAAGTATCAAAAGAGTTAATTAACCGTCTTATGAGTATTCTTGGCCATCTGATTCAGCTAAGAACATTAAAGAGAAACTTAAAAATAATGATCAGTATGGGCCTGTCAGCAAAGCAGGAGGAGGATAATAGGTTTCAACAAATAAAGAAAGAAGTTATTGACATGATTAAGATGCTGCCCCCAACTTTTGAATCCAAGCAGCAGCTGAAAGGTGAAGCATCTGGTGATTTTCAAGAATTTGGTCCTGATGGAAAAACAAATACAAAAAGAAAGTTTGCCATGGATGCTGCATTGGAGGACAAGATCTGTGATCTCTACGATATTTTTGTCGATGGATTGGATGAAAACGCAGGTCCACAGATCAGAAAGTTGTATGCTGAGCTTGCAGAACTATGGCCCAGTGGTCACATGGACAACCATGGGATCAAACGTGGAATTTGCAGGGCAAAAGAGAGGCGCAGAGCACTGTACAACAAGCATAAGGACCAGGAAAAAATTAAGAGGAAAAAGTTGCTGGCACCTAAGCAAGAGGAGAACGTTCGATTTGATGCCAATTCAATTACTTCACAACAGAACCTGCGAGAGAGATCAGCTCCTGAGTCCAGCAGTCATGGTTTTACTTCAGGGAGCAAGCAAGTTTCTAATGCAAGCCCAACTGGACGGGTACCCAGTCCAATAAATGGTCTAAAACAAGAAAAAGCAAAGGGAAATTCAAGCAGTTCCCTGGATGATGTCAGGGTTGCAGAAGGTGTGCTAACAAAGAAGGTAAAGAGAAAACCAGAACTTGAGTTAGAAGCACATTTAGTTGCTGAGAAGGTGGCTTCCTTGCAGGGAGAAGAAAGACCTAGGTCCTTAAAGCAGCAGTCCTCAGGGCCACTTGCCAACAAATCAAATCTTCAGCCAACATCTGTTCCTGATCTTCAACATTCAAGCTAA 2172 0.4185 MAEEKRASSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDSSKPNGSNSAPQQVAIAPGEPVDVEENDPSQPNRFSAVIEKIERLYMGKDSSDDEDLLDVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPAALPNQQPKKRRRKDIMKNGENNDGHGSNKNAKVGRPASGKTASLHAKNMLNISENLVAPDEHYEDLKLSNQSDVSGIISKKKTVDTKPTLDPSISLKTSNDDVTGVTDAKDADKQRIGVFQSKNISDKCKDGSGSFDASHQKYNEKSAYAHSKSQPGRPPNSIDDLENIIRTKEKSGMCELPDLNLSEAKSATQATKSENMQKKEGSSVRPKTSMLEKALRELEKMVAESRPPAVDNQDAVKRRLPREIKLKLAKVARLAATHGKVSKELINRLMSILGHLIQLRTLKRNLKIMISMGLSAKQEEDNRFQQIKKEVIDMIKMLPPTFESKQQLKGEASGDFQEFGPDGKTNTKRKFAMDAALEDKICDLYDIFVDGLDENAGPQIRKLYAELAELWPSGHMDNHGIKRGICRAKERRRALYNKHKDQEKIKRKKLLAPKQEENVRFDANSITSQQNLRERSAPESSSHGFTSGSKQVSNASPTGRVPSPINGLKQEKAKGNSSSSLDDVRVAEGVLTKKVKRKPELELEAHLVAEKVASLQGEERPRSLKQQSSGPLANKSNLQPTSVPDLQHSS* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0748 723 Pfam HPC2 and ubinuclein domain 100 142 IPR014840 -
Vra5g0748 723 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 723 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 236 251 - -
Vra5g0748 723 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 1 723 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 37 74 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 660 691 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 40 54 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 153 168 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 569 723 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 95 109 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 140 194 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 593 636 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 338 361 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 216 289 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 90 109 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 693 723 - -
Vra5g0748 723 MobiDBLite consensus disorder prediction 569 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0748 Vra-Chr5 12750917 12762047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0748 - - gsj:114415452 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0748 5 12750917 12762047 Vra5g0748 5 12750917 12762047 ECH
Vra6g1398 6 27458227 27475961 Vra5g0748 5 12750917 12762047 PCT