Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1370 ATGAAGACTCGTGGTTCCGCCATCTCTGCAAAATGGGTTCCAATTTTCTCTGTATTTTCCTTCATTCTTGGAATGATCATAACGACCAGGATGTGGGAGGCACCTGAGTCTAATGGGGTGCTTCTGTCAAATCATCGACGCGACCAAGAACTGCAAGTGGTGACAAGGGATTGTGCCACTAAAAAGGATAAGGATCTAATGAGTGAAGTGTACAAAACCCATGAGGCCATTCAATCCCTGGACAAGCAAATTTCCGCCCTTCAAATGGAGCTAGCAGTGGCAAGGAGTGGCAGAGAATCTGAAACCTCAGGTGGTTCGGCTAACACCTTGGCCAGAAGATCCTCCATTGAAGGCCCTCCAAGGAAGAAGATGTTTCTAGTGATTGGCATAAACACTGCTTTCAGTAGCAGGAAGCGACGTGATTCTGTCAGAGAGACTTGGATGCCACAAGGGCAGCAGCTTCTTCAACTGGAACAAGAGAAGGGAATTGTCATCAGATTCATGATTGGTCACAGTGCAACTTCTAACAGCATTCTTGATCGAGCTATTGATTCAGAAGAAGCTCAGCACAAAGATTTCCTTCGCCTGGAACATGTTGAAGGGTATCATGAATTGTCTGCAAAGACAAAAATTTTCTTTTCTACTGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAAGTGGATGATGATGTACATGTCAATTTAGGTGTACTTGCAACAACCCTTACTCGTCATCGTTCAAAACCCAGGGTGTACATTGGATGTATGAAATCTGGACCTGTTCTTTCACGAGAGGATGTTAAGTATCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGTAACAAATACTTCCGACATGCAACTGGACAGATATACGCAATCTCTAAGGATCTAGCCACCTACATTTCCATTAACCAGCCAATATTACACAAATATGCCAATGAAGATGTGTCACTTGGTGCATGGTTCATAGGTCTAGAAGTTGAGCACATAGATGAACACAACATGTGCTGTGGAACTCCTCCAGACTGTGAGTGGAAGGCACAAGCAGGTAACATATGTGTTGCATCCTTTGATTGGACCTGCAGTGGAATATGCAAGCCCGTGGAAAGGATCAAATATGTGCACTCAAAGTGTGGTGAAGGGGATGGAGCTATTTGGAGTGCTTTAGCTTAG 1182 0.4408 MKTRGSAISAKWVPIFSVFSFILGMIITTRMWEAPESNGVLLSNHRRDQELQVVTRDCATKKDKDLMSEVYKTHEAIQSLDKQISALQMELAVARSGRESETSGGSANTLARRSSIEGPPRKKMFLVIGINTAFSSRKRRDSVRETWMPQGQQLLQLEQEKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLTRHRSKPRVYIGCMKSGPVLSREDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDEHNMCCGTPPDCEWKAQAGNICVASFDWTCSGICKPVERIKYVHSKCGEGDGAIWSALA* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1370 393 MobiDBLite consensus disorder prediction 95 114 - -
Vra6g1370 393 MobiDBLite consensus disorder prediction 99 113 - -
Vra6g1370 393 Pfam Domain of unknown function (DUF4094) 9 96 IPR025298 -
Vra6g1370 393 Pfam Galactosyltransferase 138 334 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra6g1370 393 Gene3D - 118 341 - -
Vra6g1370 393 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 385 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra6g1370 393 PANTHER HEXOSYLTRANSFERASE 3 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1370 Vra-Chr6 26895768 26899302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1370 2 392 Glycosyltransferase AT1G77810 71.212 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1370 K20855 - gmx:100804402 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1370 6 26895768 26899302 Vra6g1370 6 26895768 26899302 ECH
Vra6g1370 6 26895768 26899302 Vra5g1270 5 19524598 19529000 PCT