Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1003 ATGAATTCTGCCAATAGTGGAAGTATCTCTTCAAGTGGCGATGAAGAATACGATTCACGACCTCATCACACACTGCTCCCTCCAACCTTCCTCAACAATCACCCTTCCCAATTCGGCTCCATCTCACACCCTCTTCTTTCTTCTTCTTCCTCTTCTTCTCATTACCACCACCACCCTCATCCTTCTTTGTTTGATCTCTCTTCAACCTACCTCCACGCCCTCTCTCAACCCAACTCCTCCAACCCAAACTCCTTCCTTCACTTGGACACCGCCACCTCATCCTCCTCCCACCCTCCAAGATCTCAACCCGATTGCACCCACCCTTCCGGAGTTAACGTTAACATTAACGTTACCTCCTCCCCTCAAACTACTACAAACATAAGCCAATGCTTGTTGGGTCCTCAAGCAGGCCTCGCCACTGACAATGCCAGATCGCAAGATGCAATCTTGCTTGAACCCGGTAGAACGATTAACAACGTCGGACGTAACTCGAAGAAGCGAACCAGAGCTTCTAGGAGAGCACCAACCACGGTTCTCACCACGGACACTTCCAATTTCAGAGCCATGGTTCAAGAGTTCACTGGAATCCCTGCACCACCGTTTTCGGCTTCTTCCTCCTACTCTCGGAGGCTCGATCTTCTCACCGGTTCCTCCTCCCTCAGAAGCAGCTCTCACTTAGACACAACCAACGGTCCTTTCTACCCTTTGCGTCCTTCGCCACAGAAGGTAAATCATCATAATCATCATCAAAACCCATTGCTTTTATCTTCCTCATCATCACCCTATAATAACATGGTTGATGCTATTACTTCCACCACCACCACCAACAACAACAACAATTCTTCATCTAACAACAACAACCCCATCAACTACCAACAACAACTTCCTCCTGATTTGGGTATACCCTATCACCATAATCCACAGAACATCATGCTGAGCATGCAGAACCACCCCACCCTTGCATTCAACCCTCCTCCAACCCCTCTTCACCCTTTTGGCCAGGCTGGGTTTAGTGCAAAGTTACCATCCATTGAGGATCTGGGTATGAGCCATGGCCAGGTTAATAATAATGCAAATTTTGTCGCAAGTGGGATATCGGTGCCACTGAGGAGTGTTAACGATGACGGAGGAGGAACAAGAGATGTTTCTTTAAGGTCATTGGATGGTGGTGGTAGCTGCAAGTTGAACTTCGCTGTGGCTTCTGCGTCCACTAGCTTGAACCGTGAGAATAGCACCTTACCAAATAACAACAACAATAATAACCCTACAACTAGAGGGGAAGGTACCGTGGATTCCTGGATTTGTTCTTCTGATTAG 1317 0.4784 MNSANSGSISSSGDEEYDSRPHHTLLPPTFLNNHPSQFGSISHPLLSSSSSSSHYHHHPHPSLFDLSSTYLHALSQPNSSNPNSFLHLDTATSSSSHPPRSQPDCTHPSGVNVNINVTSSPQTTTNISQCLLGPQAGLATDNARSQDAILLEPGRTINNVGRNSKKRTRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPFSASSSYSRRLDLLTGSSSLRSSSHLDTTNGPFYPLRPSPQKVNHHNHHQNPLLLSSSSSPYNNMVDAITSTTTTNNNNNSSSNNNNPINYQQQLPPDLGIPYHHNPQNIMLSMQNHPTLAFNPPPTPLHPFGQAGFSAKLPSIEDLGMSHGQVNNNANFVASGISVPLRSVNDDGGGTRDVSLRSLDGGGSCKLNFAVASASTSLNRENSTLPNNNNNNNPTTRGEGTVDSWICSSD* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1003 438 MobiDBLite consensus disorder prediction 75 120 - -
Vra6g1003 438 MobiDBLite consensus disorder prediction 219 289 - -
Vra6g1003 438 MobiDBLite consensus disorder prediction 1 36 - -
Vra6g1003 438 MobiDBLite consensus disorder prediction 245 289 - -
Vra6g1003 438 Pfam VQ motif 173 200 IPR008889 -
Vra6g1003 438 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 437 IPR039609 -
Vra6g1003 438 MobiDBLite consensus disorder prediction 404 438 - -
Vra6g1003 438 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1003 Vra-Chr6 13040016 13043843 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1003 - - gsj:114382008 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1003 6 13040016 13043843 Vra6g1003 6 13040016 13043843 ECH
Vra6g1003 6 13040016 13043843 Vra5g0840 5 14192396 14194133 PCT