Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0840 ATGGATTCTGGTAACAGTGGAAGCATCTCTTCCAGCGATGAAGAATACGATTCATCATCACATGCTGATCCATCCTTCCTCAATAATTTTTCTTCCTTCTCCCACCCTCAACCATCCCTTGTTCCTTCTCACCCCTCAATGTTTGATCTCTCCTCAACCTACCTCCATGCTCTCTCACAATCCAACCCCCACAATTCCTTCTTAAACATCGATTCCCTTGCCCAAAGATCTCAATCCAATTGCACTCTCCCCGAAACCCTTCCATCTTCTTCATCAGCCACGCCAGCAATAAATCAATGCTTCTCGGCTCCTCAACCCCTTGCCCACCACAACACTAGTGCAAGACAACTCTCCTCACCACCGCAAACCACCAACCTCGTACGCAACTCCAAGAAACGAAGCAGAGCTTCAAGGCGTGCACCCACCACCGTTCTCACCACCGACACCACCAATTTCAGATCCATGGTTCAAGAGTTCACTGGAATCCCTGCACCTCCCTTTTCACCTTCCTTCTCTCGCCGCCTCCCTCTTCGCTCAAACCCTTTGCTTTCAACTTCTTCAAGGACCTCCTTACACAACAACGCCACTATCAGTCTTTCTCCTAATAATAACTCCATTAACTACCAGCTACTTCCTGATCTGTCGTTACCCTATCATCCCCCACAGAATATCATGCAACATCACCCTATTCCCACATTCCACCCTTCTTATTCTCTTCAAACTCTTGTCCCTGCAGGGTTTGGTGCAAAGTCTCTATTCATGCCCGCGCTTGATGCGCACGATCTGGAGGTTGCACAGGGTCATGAACACGTGGTATCTGAGGGCATGCTTCAGAGGAGTGGCGGTGACGGTGACTGTAGAGATGGAAGCATAGTTGGAGGAGGGAGAAGAGATTCGTTTAGGTGCTTGGATGGGAACAACTATGGTGGGTGCAAGCTCAACATCTCGGTTTCTGCTTCGAGCAGCGTGAACCATGAGAAGAACTTGGAGAATGGTAATTCCCCTAGGGAAGGTGCCGTGGAAGCGTGGATTTGTTCTTCTGATCAATAG 1050 0.4905 MDSGNSGSISSSDEEYDSSSHADPSFLNNFSSFSHPQPSLVPSHPSMFDLSSTYLHALSQSNPHNSFLNIDSLAQRSQSNCTLPETLPSSSSATPAINQCFSAPQPLAHHNTSARQLSSPPQTTNLVRNSKKRSRASRRAPTTVLTTDTTNFRSMVQEFTGIPAPPFSPSFSRRLPLRSNPLLSTSSRTSLHNNATISLSPNNNSINYQLLPDLSLPYHPPQNIMQHHPIPTFHPSYSLQTLVPAGFGAKSLFMPALDAHDLEVAQGHEHVVSEGMLQRSGGDGDCRDGSIVGGGRRDSFRCLDGNNYGGCKLNISVSASSSVNHEKNLENGNSPREGAVEAWICSSDQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0840 349 MobiDBLite consensus disorder prediction 1 40 - -
Vra5g0840 349 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 346 - -
Vra5g0840 349 MobiDBLite consensus disorder prediction 107 143 - -
Vra5g0840 349 Pfam VQ motif 139 166 IPR008889 -
Vra5g0840 349 MobiDBLite consensus disorder prediction 107 130 - -
Vra5g0840 349 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 346 IPR039609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0840 Vra-Chr5 14192396 14194133 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0840 - - gsj:114410527 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1003 6 13040016 13043843 Vra5g0840 5 14192396 14194133 PCT