Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0989 ATGTTGCTGGGTAAGAGACCTCGTCCTCCAATGAAGAGAACCACCAGCATGTCCGAAATAACGTTGGATCTGAACGCCGCCGCCTCCGATGTAACCGACCAACGGAGATCAGGTGCTGGTGGCGGCGCTAGTGGCGGCGCGTTAACACCAAAAATTCTTAGAAGACATTCTTCGGATTTCGTAGACACACCACACTTCCTGCGCGCGTGTGCCCTCTGCAAAGGCCGTCTCGCACCCGGTCGAGACATCTACATGGGTGATAATGCTTTCTGCAGCCTGGAGTGTCGTCAGCATCAGATGAACCAGGACGAGAGGAAAGAGAAGTTTGTGACGGCGTCGAAGAAGCAAGTCGTGGCTCCTCCACCGTCTGGTTCTCAAATCGCCGCCACCACCAAGGGCGAAACCACCTTGGTGGCGTTGTAG 423 0.5532 MLLGKRPRPPMKRTTSMSEITLDLNAAASDVTDQRRSGAGGGASGGALTPKILRRHSSDFVDTPHFLRACALCKGRLAPGRDIYMGDNAFCSLECRQHQMNQDERKEKFVTASKKQVVAPPPSGSQIAATTKGETTLVAL* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0989 140 PANTHER - 1 33 - -
Vra6g0989 140 PANTHER - 47 138 - -
Vra6g0989 140 MobiDBLite consensus disorder prediction 28 49 - -
Vra6g0989 140 Pfam zinc-finger of the FCS-type, C2-C2 58 106 IPR007650 -
Vra6g0989 140 ProSiteProfiles Zinc finger FLZ-type profile. 65 107 IPR007650 -
Vra6g0989 140 PANTHER FCS-LIKE ZINC FINGER 5 1 33 - -
Vra6g0989 140 PANTHER FCS-LIKE ZINC FINGER 5 47 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0989 Vra-Chr6 11867855 11869004 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0989 - - gmx:100527853 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0989 6 11867855 11869004 Vra6g0989 6 11867855 11869004 ECH
Vra6g0989 6 11867855 11869004 Vra5g0909 5 15219388 15220493 PCT