Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0909 ATGTTGTTAGGGAAGAGACCTCGTCCTCCAATGAAGAGAACTACCAGCATGTCAGAGATAACCTTCGATCTCAACACAACCTTGGACGACGATGACCAAAACAACCCCGTCAAGGGAGGACTTGGGCCGGACCCATGGACGAAGCACCCACCGCCAGTTGGGTCGAACGGCTTAGATCAGAGCCGGGTTCGGGCCTTGGTTTCACCCAGAAACCATAGAAGGCATTCGGAAGATTCCGCACACACCCCCGAGTTTTTGCGCGTTTGCTTTCTCTGCAAACGCCGTTTAGTTCCTGGTCGTGACATCTACATGTACAAAGGTGACAGTGCTTTCTGCAGTTCAGAATGCCGAGAAAACCAGATGAAGCAGGATGAGCGAAAGGATAATAATAAGTGTGGTTTGGCATCAAAGAAACAAGTTGCAGCTACCCCTTCTGGGTCTCAAGTTAGAAGTACCAAAGGCGAAACCGTTGTTGCCTTGTAG 483 0.501 MLLGKRPRPPMKRTTSMSEITFDLNTTLDDDDQNNPVKGGLGPDPWTKHPPPVGSNGLDQSRVRALVSPRNHRRHSEDSAHTPEFLRVCFLCKRRLVPGRDIYMYKGDSAFCSSECRENQMKQDERKDNNKCGLASKKQVAATPSGSQVRSTKGETVVAL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0909 160 PANTHER FCS-LIKE ZINC FINGER 5 1 156 - -
Vra5g0909 160 MobiDBLite consensus disorder prediction 1 80 - -
Vra5g0909 160 Pfam zinc-finger of the FCS-type, C2-C2 77 127 IPR007650 -
Vra5g0909 160 ProSiteProfiles Zinc finger FLZ-type profile. 84 128 IPR007650 -
Vra5g0909 160 PANTHER - 1 156 - -
Vra5g0909 160 MobiDBLite consensus disorder prediction 140 154 - -
Vra5g0909 160 MobiDBLite consensus disorder prediction 14 33 - -
Vra5g0909 160 MobiDBLite consensus disorder prediction 136 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0909 Vra-Chr5 15219388 15220493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0909 - - var:108331042 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0989 6 11867855 11869004 Vra5g0909 5 15219388 15220493 PCT