Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0738 ATGGTGGCTTTGGTTTCCCAAGACAACAACGTTGTTGCATTGGTTTCTCGTACAGGTAGAGAGTTACAACGCTACAGGAAAGGTCGTCGCCAAGTCGTGGGATGCATACCCTATAGATATAAAATTGTGGATCGAACTTCGTTGGAGGGACCAGAAGATTTAGAAGTTTTGGTCATCACTTCTCAAAAAGGCAAAGGGATGCTGTTTCCTAAGGGAGGTTGGGAATTGGACGAATCCAAAAAGGAGGCAGCTTTGAGAGAAACCATAGAGGAAGCAGGGGTTCGAGGCACTGTTGAGGGGAAATTGGGTAAGTGGAGTTTCAAGAGCAAGACTCATGATACATTTTATGAGGGCTACATGTTCCCTCTACTTGTCCAAGAGCAATTGGAGTTCTGGCCTGAGCAGAATTTTCGTCAAAGAACATGGATGAGCGTTTCTGACGCAAGGGAAGTTTGTCAACACTGGTGGATGAAAGAAGCTCTAGAGAGACTAGTAAACCGTCTAATGGCTCGGAAACTTGGTCGTGTGAGACAAATAGTAGGTTCTATACACTGCATAGGAGATGGCAATTCTGACTTGTAA 582 0.4485 MVALVSQDNNVVALVSRTGRELQRYRKGRRQVVGCIPYRYKIVDRTSLEGPEDLEVLVITSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGTVEGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQNFRQRTWMSVSDAREVCQHWWMKEALERLVNRLMARKLGRVRQIVGSIHCIGDGNSDL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0738 193 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 9 189 - -
Vra6g0738 193 CDD Nudix_Hydrolase_9 31 158 - -
Vra6g0738 193 ProSiteProfiles Nudix hydrolase domain profile. 28 165 IPR000086 -
Vra6g0738 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 9 189 - -
Vra6g0738 193 Pfam NUDIX domain 55 163 IPR000086 -
Vra6g0738 193 SUPERFAMILY Nudix 24 168 IPR015797 -
Vra6g0738 193 ProSitePatterns Nudix box signature. 72 93 IPR020084 GO:0016787
Vra6g0738 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0738 Vra-Chr6 7083178 7084612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0738 K07766 - gmx:100798559 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0933 3 9362170 9364160 Vra6g0738 6 7083178 7084612 PCT