Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0933 ATGGTGGCTGTGGTTGCCCAGGAAAATGTTGTGGCATTGGTTTCTCGTACCGGCAGGGAGTTGCAACGTTATAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCGTACAGATTTAAGATTGGGCAGAAAACTTCATTGGACGTTTCTGATGAATTGGAAGTTCTGGTTATCAGTTCTCAGAAGGGAAAAGGGATGCTATTTCCGAAGGGAGGTTGGGAATTGGACGAATCAAAAAAGGAGGCAGCTTTGAGAGAAACCATAGAGGAAGCTGGGGTGAGAGGCATTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGTAAGACTCATGACACTTTCTATGAAGGCTACATGTTCCCTTTACTTGTTCAAGAGCAACTGGAGTTCTGGCCTGAGCAAAAAGTTCGTCAAAGAGTATGGATGAGCGTCACCGAAGCAAGGGATGTTTGTCAACACTGGTGGATGAAGGAAGCTCTAGACAGATTAGTAAACCGTCTAGCTGGTCAAAAAGTCGGTCGTGATAATAAGCAAGTTCTTGGTTCTATTATAAACTGCACAAGAGATGCCAAATCTGACTTGTAA 585 0.4427 MVAVVAQENVVALVSRTGRELQRYRKGRRQVVGCIPYRFKIGQKTSLDVSDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGIVGGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQKVRQRVWMSVTEARDVCQHWWMKEALDRLVNRLAGQKVGRDNKQVLGSIINCTRDAKSDL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0933 194 Pfam NUDIX domain 54 161 IPR000086 -
Vra3g0933 194 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 172 - -
Vra3g0933 194 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 172 - -
Vra3g0933 194 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Vra3g0933 194 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Vra3g0933 194 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Vra3g0933 194 CDD Nudix_Hydrolase_9 30 157 - -
Vra3g0933 194 SUPERFAMILY Nudix 21 167 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0933 Vra-Chr3 9362170 9364160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0933 K07766 - gmx:100795999 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0933 3 9362170 9364160 Vra6g0738 6 7083178 7084612 PCT