Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0671 ATGGGACATGTAAAGTTGCAAACGCAAACTGGCATCAATGCAATAGAAGAGGCATCTGGACAGTGTGATGCTGGGTATCCTGACAAAACTACTGTGGCATGCATGATCAATGCAGAAATTGGTGCTGTTTTGGCTGTCATGAGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGATCAGTTGGAGCATTCCCTTGTTCAGTCTCTGAAGGCATTAAGGAAGCAAATTTTTTCTTGGCAGAATCAGTGGCATGTAATAAGCCCTGCCTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCAGATGAAACCGGTGCACCAATTACTGGTGTCGCTCTATCATCTGTTTACAAGATCTTGACATTGGATGTAATTGATCAAAATACTGTTAATGTTGGGGATGCCATGCACTTGGTAGTTGATGCTGTTACAAGTTGCAGGTTTGAGGTGACTGATCCTGGATCGGAAGAAGTGGTATTAATGAAGATATTACAAGTTCTTCTAGCATGTGTGAAGAGCAAAGCATCTATGATGCTGAGTAACCAACATATTTGCACCATAGTAAATACTTGTTTCCGTATAGTTCATCAAGCAGGAACCAAAAGTGAATTGTTGCAGCGGATAGCACGTTACACAATGCATGAACTTGTTCGGTGTATTTTTTCTCACCTTCAAGATATTGACAACGCAGAACTTGCTTTAAATAATGGCAGCACTGCTTTACAGAAAGAGATTGTTGGGCTAAATAATGATCATAATTCTCCAAATAGACAATTGGACAACGGGAACTTGACTTCTGCTAGTAATGGTCAACCCTTATCCACAGGCATTGCTCCTAGTACTGTGAGTGATGTGGCAGCCACTGTATTAGATGAAGACACAGCAATTGCAAGCAGTGATCAAGAGGCTGACCTGAATGAGTTGCAGCTTATAAATGAACCATATGGGATTCCCTGCATGGTGGAAATATTTCACTTTTTGTGTTCTTTGCTGAACGTTGCTGAACATGTGGGAAATAGTCCTCGCTCTAACACTATAGCATTTGATGAAGATGTGCCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATAGAGTTGGGAGGGCCTTCCTTTCACCAGCACCCTAGATTGCTAAGCTTAATTCAGGATGAATTATTCCGCAATCTTATGCAATTTGGTTTGTCAATGAGTCCTCTCGTACTTTCAATGGTATGTAGCATTGTTCTAAATTTGTATCACCATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAATATGGTGCTTCATATCAGCAGCAGGAAGTTGTCATGGAGGCCCTTGTTGACTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTATGCTAACTTTGACTGTGACCTAACTTGCAGTAATGTCTTTGAAGACATTGCTAATTTGTTGTCCAAAAGTGCTTTTCCTGTGAACAGTCCATTGACTTCCATGCATATTCTTGCTTTGGAGGGTCTTATTGCTGTCATGCACGGAATGGCTGAAAGGATAGGCAATGGATCTTTAAGTTCAGAACAATCTCCTGTGAATCTTGAAGAGTATACTCCGTTCTGGCAGGAAAAGTGTGAAAATTTTTGTGATCCAAAAAATTGGGTTCCTTTTGTATCCCGGAGAAAGTACTTCAAGAAAAGATTGATGATTGGTGCTGATCATTTTAATCGTGATACTAAGAAAGGTCTTGAGTTTCTCCAAGGAACACATCTTTTACCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTTTCAGATACACTGCTGGGTTGGATAAGAATCTCATTGGTGATTTTCTAGGAAATCATGATGAATTCTGCATTGAAGTTCTTCGTGAATTTGCTAAAACATTTGATTTCAAAGACATGATGTTAGACACTGCCCTACGCCTATTTTTGGAGACTTTCAGACTGCCTGGAGAATCACAGAAGATACAGAGGGTGCTTGAAGCTTTCTCAGAACGATATTATGAACAGTCTCCACAGATCCTAGCCAATAAAGATGCTGCTCTGTTGTTATCATACTCAATTATAATGCTTAATACAGATCATCACAATTCACAGGTCAGAAACAAGATGACAGAAGAGGATTTTATCCGTAATAATAGGCGAATAAATGGTGGCAGTGATCTACCTCGAGAGTTTCTGTCTGAACTTTACCATTCAATTTGTAAGAATGAGATTCGAACAACTCCTGAGCAAGGTTCTGGTTTCCCTGAAATGACCCCAAGTCGGTGGATTTATCTCAAGCATAAGTCAAAAAAATCTGATCCATTCATTGTTTCTGATTCCAAAGCATACCTTGATTATGATATGTTTTCTATATTGTCTGGTCCAACAATTGCGGCAATTTCTGTGGTATTTGATAATGCTGAGAATGCGGAGGTATACCAAACATGTATGGATGGATTCATAGCTGTTGCAAAGATATCAGCTTACTATCATCTTGAAAATATACTGGATGATTTGGTCGTGTCACTTTGTAAGTTTGTTACTGTTTTTGATCCATTAGCTGTTGAGGAATCCATCCTAGCCTTTGGAGAAGACATGAAAGCAAGAATGGCAACTGAGACAGTTTTCACTATTGCAAATAGGTATGGTGATTTCATCCGCACAGGGTGGAGAAATATTCTTGATTGCATCTTAAAATTTCATAAGTTAGGGCTTCTTCCTACTCGTATTGCCAGTGATGCAGCAGAAGAGTCAGAGCTTTCTACAGAAACTGAGGATGGGGGGAAGCGTACTATTAATGCTTTATCTTTATCGCGTCTTCCATCTGTAAATACTACAAAGAGATCCTCTGGATTGATGAGCAGGTTTAGTCAACTCTTGTATCTAGGTGCCGAAGAGCCAAAATCAGTTCCTAGTGAAGAACAACTTGCTGCTCAGCAATGCACCCTTCAAACAATTCAGAAGTGTCACATTGACAGCATATTCTCTGAGAGTAAATTTTTGCAAGCCGAATCTCTATTGCAGCTTGCAAAAGCAATCACTAGTGCAGGAGTGAGACCTAAGAAAGGAAACAGCACGTCTGAGGACGAAGATACTTTGGTTTTCTGCCTGGAGTTACTGGTAGCAGTCACTCTGAATAACAGGGATAGAATTGAACTTCTTTGGCAGGGTGTATATGAGCATATTTCCAACATTGTTCAGTCAACCGTGATGCCTTGTGCACTGGTAGAGAAGGCTGTTTTTGGCCTTTTACGAATTTGTCATCGGTTACTTCCCTATAAAGAGAACATTACTGATGAACTTCTGAGGTCTCTGCAACTTGTCCTTAAGCTTGATGCTCGTGTTGCTGATGCATATTATGAGCAGATAACACAGGAAGTTAGTCACCTCATGAAGGCAAATGCCTCTCATATTAGATCTCATTTAGGATGGCGGACAATTACATCACTGCTTTCCATCACTGCTAGACACCTGGAAGCAGCTGAGGCCGGTTTTGACGCATTGTTGTTCATTATGTCAGATGGAGCCCACTTGCTTCCAGCTAATTATGTTCTCTGCATAGATGCAGCCAAGCAGTTTGCTGAATCTCGTGTTGGACAGGTTGAACGGTCTGTAATGGCCCTTGATCTTATGTCAGGGTCTGTCAGTTGTTTAGAGAAGTGGACTAAGGATGCTAAGCAAGCAACGAAAGAAGAGGAATTGGCAAAGGTGTTGCAGGATATTGGGGACATGTGGTTGAGGCTCGTACAGGGACTAAAAAAACTGTGTCTGGACCAGAGAGAGGAGGTTAGAAACCATGCGTTGTTATCTTTACAAAAGTGCTTGACAGGATCAGTGGGGATTAATCTCCCACATAGCTTGTGGTTACAATGTTTCGATCAAGTGATCTTCTCTGTGCTTGATGACCTGATTGAAATTTCTCAAACACAGTCTCAAAAGGACTACCGGAACATAGAAGGAACACTTGTTCTTGCTCTGAAGCTCCTGTGTAAAGTTTTCCTCCAGTTAATCCAATATCTATCAGAATTGCCAGACTTCAGCACATTATGGCTGGCTGTACTAAGTCGGTTAGAAACTTATATGAAGGTGAAAATTAGAGGAAGGAGAAGCGAGAAGCTTCACGAACTTGTGCCTGAGCTTCTTAAGAACACTGTGCTTGTAATGAAAACGGGGCAAGTACTAGTGCGGAGCAGTAGTGTAGATGGAAGTAGTTTGTGGGAACTGACATGGCTGCATATAAATAATATTTCTCCGTCAATGCAAGTTGAGGTGTTCCCGGAGTCAGATTCCAAGGATTTGCAGAAAAAACAGACTGAAAAGGTTGAAGGTTTGGTATCTGATGAAAACAATTCTGTGTCTTCAAATGAAACAGCAGGTCAAGATGGTCCTGGTATTAGTTAA 4422 0.4066 MGHVKLQTQTGINAIEEASGQCDAGYPDKTTVACMINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKALRKQIFSWQNQWHVISPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVNVGDAMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASMMLSNQHICTIVNTCFRIVHQAGTKSELLQRIARYTMHELVRCIFSHLQDIDNAELALNNGSTALQKEIVGLNNDHNSPNRQLDNGNLTSASNGQPLSTGIAPSTVSDVAATVLDEDTAIASSDQEADLNELQLINEPYGIPCMVEIFHFLCSLLNVAEHVGNSPRSNTIAFDEDVPLFALTLINSAIELGGPSFHQHPRLLSLIQDELFRNLMQFGLSMSPLVLSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEVVMEALVDFCRQKTFMVEMYANFDCDLTCSNVFEDIANLLSKSAFPVNSPLTSMHILALEGLIAVMHGMAERIGNGSLSSEQSPVNLEEYTPFWQEKCENFCDPKNWVPFVSRRKYFKKRLMIGADHFNRDTKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLIGDFLGNHDEFCIEVLREFAKTFDFKDMMLDTALRLFLETFRLPGESQKIQRVLEAFSERYYEQSPQILANKDAALLLSYSIIMLNTDHHNSQVRNKMTEEDFIRNNRRINGGSDLPREFLSELYHSICKNEIRTTPEQGSGFPEMTPSRWIYLKHKSKKSDPFIVSDSKAYLDYDMFSILSGPTIAAISVVFDNAENAEVYQTCMDGFIAVAKISAYYHLENILDDLVVSLCKFVTVFDPLAVEESILAFGEDMKARMATETVFTIANRYGDFIRTGWRNILDCILKFHKLGLLPTRIASDAAEESELSTETEDGGKRTINALSLSRLPSVNTTKRSSGLMSRFSQLLYLGAEEPKSVPSEEQLAAQQCTLQTIQKCHIDSIFSESKFLQAESLLQLAKAITSAGVRPKKGNSTSEDEDTLVFCLELLVAVTLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICHRLLPYKENITDELLRSLQLVLKLDARVADAYYEQITQEVSHLMKANASHIRSHLGWRTITSLLSITARHLEAAEAGFDALLFIMSDGAHLLPANYVLCIDAAKQFAESRVGQVERSVMALDLMSGSVSCLEKWTKDAKQATKEEELAKVLQDIGDMWLRLVQGLKKLCLDQREEVRNHALLSLQKCLTGSVGINLPHSLWLQCFDQVIFSVLDDLIEISQTQSQKDYRNIEGTLVLALKLLCKVFLQLIQYLSELPDFSTLWLAVLSRLETYMKVKIRGRRSEKLHELVPELLKNTVLVMKTGQVLVRSSSVDGSSLWELTWLHINNISPSMQVEVFPESDSKDLQKKQTEKVEGLVSDENNSVSSNETAGQDGPGIS* 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0671 1473 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Vra6g0671 1473 Gene3D - 561 643 - -
Vra6g0671 1473 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1463 - -
Vra6g0671 1473 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 11 1463 - -
Vra6g0671 1473 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Vra6g0671 1473 SUPERFAMILY ARM repeat 352 1366 IPR016024 -
Vra6g0671 1473 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Vra6g0671 1473 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Vra6g0671 1473 Gene3D - 644 761 IPR023394 -
Vra6g0671 1473 SUPERFAMILY Sec7 domain 565 752 IPR035999 GO:0005085|GO:0032012
Vra6g0671 1473 MobiDBLite consensus disorder prediction 1451 1473 - -
Vra6g0671 1473 MobiDBLite consensus disorder prediction 1434 1473 - -
Vra6g0671 1473 MobiDBLite consensus disorder prediction 1435 1450 - -
Vra6g0671 1473 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0671 Vra-Chr6 6229662 6237378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0671 K18443 - gmx:100784083 2664.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0671 6 6229662 6237378 Vra3g0981 3 9873300 9880073 PCT