Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0627 ATGAAGAAACTCTGTCCCAATCTTGCTCGCCAGGATGGGCTCCAAACGGTGCTGGAGGTTCCCATCCCAGAAGAGATTTTCACCATCAAAAGCGGAACCAGCAGAGCTTGGCATAACATGAAGTCATGGATGAAGCCAAACGTTGAATCTTCTGCATCATCATCACTCTTTGGAGACCAAAATACTGATATCCAACTCTTGCTTGGTGTTGTTGGAGCACCATTGATCCCTCTCCCTGTCACCTCTCACAACCAACCCATCACCATTAAATCCCGTAACATTGAGGCTTCGATGGCGAAATACATTGTGAAACAGTACGTGGCGGCTGTGGGAGGAGAGAGTGCTTTGAATTGGGTGGAAAGCATGTACGCTATGGGGGAGGTGAGGGTAGGGACAACAGAGTTTTCAGGAAGTGAAGAATGTGTGAGTAAGAAGAAGATGGTGAAGGTGAAGAAGATGCAGAAGAAAGGGGAAGTGGGAGGATTTGTTGTGTGGCAGAAGAAGCCAGAACTGTGGTGTTTGGAGCTGGTTGTTTCTGGGTACAAAATCAGTGCCGGGAGTGATGGGAAAGTGGCATGGAGGCAAACACCTTGGCACCATTCTCATGCTTCTCGTGGCCCACCAAGACCACTCAGGCGTTTACTTCAGGGTCTTGATCCAAGGTCCACAGCCAATTTGTTCAACAACTCCATATGCATTGGAGAGAAGACAGTGAATAACGAAGAATGTTTCATATTGAAACTTGAAGCAGATTCCAATACACTTCAAACAAGAAGTAGCAGCAACGTAGAGATTATACGTCACACTGTGTGGGGCTACTTCAGCCAAAGAACAGGTCTTTTGGTCCAATTAGAGGACTCTCACTTGCTGAAACTCAAAACCACAGCAAGTGATGCTATATTCTGGGAAACCAACATGGAGTCCCTAATACAAGACTACAAGAATGTGGATGGAATTAACATAGCACATGCAGGAAAAACTTGGGTGACACTGTCTAGGTTTGGTGAAGGCCCAGAGAGCCATTCCAAAACCAGAGTAAAAGAGGTTTGGAAGATTGAAGAAGTGGATTTTAACATCAAAGGGTTGTCCATTGATTGCTTCCTACCACCCAGTGATTTGAAGAAAGAGGAAGAAAAAGTGGTGGAAGAGTGTAGGGTGGCTGCAAGCAATACAAAGTTACCTTACAAGATTCAATCTGCTTCTTTTAAGATTAGTGTTTCCAAAGTAGCTGCTGTTAATGTGGATGATTCAAGTGGTAGTGAAAGTGATGGTGATGAAGAAGACATGTAA 1290 0.4481 MKKLCPNLARQDGLQTVLEVPIPEEIFTIKSGTSRAWHNMKSWMKPNVESSASSSLFGDQNTDIQLLLGVVGAPLIPLPVTSHNQPITIKSRNIEASMAKYIVKQYVAAVGGESALNWVESMYAMGEVRVGTTEFSGSEECVSKKKMVKVKKMQKKGEVGGFVVWQKKPELWCLELVVSGYKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRLLQGLDPRSTANLFNNSICIGEKTVNNEECFILKLEADSNTLQTRSSSNVEIIRHTVWGYFSQRTGLLVQLEDSHLLKLKTTASDAIFWETNMESLIQDYKNVDGINIAHAGKTWVTLSRFGEGPESHSKTRVKEVWKIEEVDFNIKGLSIDCFLPPSDLKKEEEKVVEECRVAASNTKLPYKIQSASFKISVSKVAAVNVDDSSGSESDGDEEDM* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0627 429 PANTHER LIPASE 1 420 - -
Vra6g0627 429 PANTHER LIPASE 1 420 IPR006873 -
Vra6g0627 429 Pfam Protein of unknown function (DUF620) 122 370 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0627 Vra-Chr6 5749987 5752830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0627 - - gmx:100820581 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1010 3 10149854 10153027 Vra6g0627 6 5749987 5752830 PCT