Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1010 ATGAAGAAGCTTTGTCCCAATCTTGATCGCGAGGATGGGCTCGAAACCGTTCTTGAGGTCCCTATCCCGGAGGAGATTCTCACCCACAAGAGTGGAACCACCAAAGCTTGGCACAACATGAAGAACTGGATGAAGCCCCACGCTGAGTCCAGATCAAACTCCACGTCCATGGCGGCAGTTTTTGGAGGGAAAAACACAGAGATTCAGCTTTTGTTGGGTGTTGTTGGAGCGCCATTAATCCCTTCACCCATCGCCTCTGACAACCAACCCATCACTCGCAGCATTAAAGACCAACACATTGAGGTTTCGATGGCTAAATACATAGTGAAGCAGTATGTGGCGGCGGTGGGAGGAGAACGTGCTTTGAATTGTGTGGACAGCATGTATGCGATGGGGCAGGTGAAGATGGCAACAACAGAGTTTTCTGCTGGAGAAGGTAGTGTGAACAGTAAGAAAGTGATGAAAGTGAAGAATTTGCAGATGAAGGGAGAGATGGGGGGATTCGTGGTTTGGCAGAAGAGGCCAGAGTTATGGTGCTTAGAGCTTGTGGTTTCTGGTTACAAGATCAGTGCAGGGAGTGATGGTAAAGTGGCATGGAGGCAAACCCCTTGGCACCATTCTCATGCTTCTCGTGGCCCACCAAGACCTCTTAGACGTTTCTTACAGGGTCTTGATCCAAGGTCGACAGCTAATTTGTTCGGCAACTCTATCTGCATTGGAGAGAAGACAGTGAACAACGAAGATTGTTTCATATTGAAAGTGGAAACCGAGACGTCGACACTGAGAGCAAGGAGCAACAGCAACGTAGAGATAGTTCGGCACACGGTGTGGGGGTATTTCAGCCAAAGAACAGGTTTATTAGTTCAACTGGAAGACTCTCACTTACTAAAACTAAAGTCTCATGAACACGAGAGCATATACTGGGAAACGAACATGGAGTCTCTGTTACAAGACTACAGAAGCGTGGATGGCATTCAAATAGCACACGGTGGCAAGACTTGGGTGTCCTTGTTGAGGTTTGGTGGGGGCCCCGAGACACATTCCAGGACACTAATGGAAGAAGTTTGGCAAGTTGAGGAAGTGGACTTTAACATCAAAGGGTTGTCCATAGACTGTTTTTTGCCTCCTAGTGATTTGAAGAGAGAGGAAGATAATGAAGAGGAAGCAGAGTGTGGTGGTGGGGTGGTTGCAAGCAATAATGCCAAGCTACCCTACAAGATTCGTTCGGCTTCTTTTAGGATCAGTGCTTCAAAAGTAGCAGCTGTCAACTTGGATGATTCCTGTACCAGCGAGAGCGATGAAGATTTGTAA 1311 0.4752 MKKLCPNLDREDGLETVLEVPIPEEILTHKSGTTKAWHNMKNWMKPHAESRSNSTSMAAVFGGKNTEIQLLLGVVGAPLIPSPIASDNQPITRSIKDQHIEVSMAKYIVKQYVAAVGGERALNCVDSMYAMGQVKMATTEFSAGEGSVNSKKVMKVKNLQMKGEMGGFVVWQKRPELWCLELVVSGYKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFGNSICIGEKTVNNEDCFILKVETETSTLRARSNSNVEIVRHTVWGYFSQRTGLLVQLEDSHLLKLKSHEHESIYWETNMESLLQDYRSVDGIQIAHGGKTWVSLLRFGGGPETHSRTLMEEVWQVEEVDFNIKGLSIDCFLPPSDLKREEDNEEEAECGGGVVASNNAKLPYKIRSASFRISASKVAAVNLDDSCTSESDEDL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1010 436 PANTHER LIPASE 1 429 - -
Vra3g1010 436 Pfam Protein of unknown function (DUF620) 128 376 IPR006873 -
Vra3g1010 436 PANTHER LIPASE 1 429 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1010 Vra-Chr3 10149854 10153027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1010 - - gmx:100782214 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1010 3 10149854 10153027 Vra6g0627 6 5749987 5752830 PCT