Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0625 ATGGTACCCCTGGGTTGGGAATGGGGTGTGATTGGTTTGATTCTAGCCACTGCGATTTCGCTCTACGCCAACGCTCTTATTGCTAGGCTTCATGAATTTGGAGGAACAAGGCATATTCGATACAGAGATCTTGCTGGATTTATATATGGGAGCAAAGCTTATTCCCTCACATGGACTCTGCAGTATGTCAATCTTTTCATGATAAATGTTGGCTACATCATTTTGGCTGGTTCGGCTTTGAAGGCTGCTTATGTTCTATTTAGGGATGACGATGGGATGAAGCTTCCTTATTTTATTGGCATAGCTGGATTGGTTTGTGCAATGTTTGCCATTTGTATTCCCCATTTATCGGCTCTTGGAATTTGGCTGGGATTTTCAACAGTCTTGAGCCTAGTGTATATTGTTATAGCATTTGTTCTGTCGGTCAAAGACGGTATAAAATCACCACCTCGTGATTATAGTATTCCGGGGACACCAACAAGTAAAATATTCACAACAATTGGAGCATCTGCTAATCTTGTGTTTGCATATAATACAGGAATGCTTCCTGAGATACAGGCAACCATCAAGCAGCCAGTTGTGAAGAACATGATGAAAGCTCTGTACTTTCAGTTTACCGTTGGAGTTCTGCCGTTATATATGGTAACATTTGGAGGATACTGGGCTTACGGATCTTCAACACCAACCTATTTGATGGCTGGTGTAAATGGTCCAGTCTGGGCTAAGGCCATGGCCAATATTGCAGCTTTTCTTCAATCAGTCATTGCATTGCATATATTTGCGAGTCCAATGTATGAGTATTTGGATACGAAACATGGGATCAAAGGGAGTGCTCTGGCTTTTAGGAACTTGTCATTTCGAATCATGGTGAGAGGTGGGTACCTCGCTATAAATACGTTTGTATCAGCTGTACTGCCATTTCTTGGAGATTTCATGAGCCTCACTGGAGCAATCAGCACATTTCCCCTTACATTTATCCTTGCAAACCATATGTACCTGGTGACACAGAAAAACAAACTAACGTCCATCCAGAAGCTCTGGCATTGGATCAATATTTGTTTCTTTGCCATCTTGTCTGCTGCGGCAACTATTGCAGCCCTGCGGCTTATTGCTGTAGACTCCAAAACCTACCATCCTTTTGCAGATGTATGA 1152 0.4245 MVPLGWEWGVIGLILATAISLYANALIARLHEFGGTRHIRYRDLAGFIYGSKAYSLTWTLQYVNLFMINVGYIILAGSALKAAYVLFRDDDGMKLPYFIGIAGLVCAMFAICIPHLSALGIWLGFSTVLSLVYIVIAFVLSVKDGIKSPPRDYSIPGTPTSKIFTTIGASANLVFAYNTGMLPEIQATIKQPVVKNMMKALYFQFTVGVLPLYMVTFGGYWAYGSSTPTYLMAGVNGPVWAKAMANIAAFLQSVIALHIFASPMYEYLDTKHGIKGSALAFRNLSFRIMVRGGYLAINTFVSAVLPFLGDFMSLTGAISTFPLTFILANHMYLVTQKNKLTSIQKLWHWINICFFAILSAAATIAALRLIAVDSKTYHPFADV* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0625 383 Pfam Transmembrane amino acid transporter protein 1 364 IPR013057 -
Vra6g0625 383 PANTHER PROLINE TRANSPORTER 1 1 378 - -
Vra6g0625 383 PANTHER OS05G0424000 PROTEIN-RELATED 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0625 Vra-Chr6 5709817 5712822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0625 1 383 Organic Solute Cotransporters AT2G39890 74.935 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0625 - - gmx:100500168 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0625 6 5709817 5712822 Vra6g0625 6 5709817 5712822 ECH
Vra3g1012 3 10178619 10184553 Vra6g0625 6 5709817 5712822 PCT