Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1012 ATGGGAAGAGGAGACATTGAACTCGAAACAAACAAGGTCTATGACCACGATGATGTAGCAGACATTGAAGTTCCAAGTACCGCTCATCAAATTAGCAGCGATTCATGGTTTCAAGTGGGCTTTATCCTCACAACTGGAATCAACAGTGCCTATGTGCTTGGATATTCAGGAACCGTTATGGTTCCATTGGGATGGACAGGGGGTGTGGTTGGTCTAGTTCTTGCTACCATAATATCACTCTATGCAAATGCTTTAATTGCTCATCTCCATGAATATGGAGGACAAAGGCATATTAGGTATAGAGATCTTGCTGGATTTGTGTATGGTAAGAAGGTCTATTCTCTCACATGGGCTCTGCAGTATATCAATCTTTTCATGATAAATACTGGCTACATCATTTTAGCCGGTTCAGCCTTGAAAGCTACTTACGTTCTATTCAGGGATGATGGTCTATTGAAACTTCCATATTGCATTGCCATAGCTGGACTCGTGTGTGCAATGTTTGCCATCTGCATTCCTCATCTTTCAGCTCTTGGAATTTGGCTTGGATTTTCAACTATCTTCAGCCTAATATACATTATCATATCATTTTTGCTGTCGCTTAAGGATGGATTACAATCCCCGCCTCGTGATTACAACCTCCCAGGAGATGGTTTCAGCAAAGTATTCACCATAATTGGGGCATCTGCAAACCTTGTGTTTGCATTTAATACGGGCATGCTTCCTGAGATACAGGCAACAATTAGGCAGCCAGTTGTGAAGAACATGATGAATGCACTGTACTTTCAGTTTACTGTTGGAGTTTTACCTTTGTACCTAGTTACGTTCACAGGATATTGGGCTTATGGATCTTCTACATCAGTGTATTTGCTTAACAGTGTAAATGGTCCAGTTTGGGTGAAGGCTTTGGCCAATATTACAGCCTTTCTTCAATCGGTCATCGCATTACATATTTTTGCAAGTCCAATGTACGAGTTTTTGGATACTAAATATGGGATCAAGGGAAGCGCATTGAATGTTAAAAACATGTCATTTCGAATCGTGGTAAGAGGTGGTTACCTGGCTTTTAACACATTTGTGTCGGCTTTCTTGCCATTCCTTGGAGATTTCATGAGTCTGACGGGGGCGATAAGCACATTTCCCCTTACATTTATTCTTGCAAACCATATGTACCTTAAGGCAAAGAAGGACAAACTAACAAGCTCGCAAAAGCTATGGCATTGGTTAAACATTGGTTTCTTTTCCATCATGTCTATTGCAGCAACAATTGCTGCCATTCGACTTATTTCTGTAGACTCCAAAACATACCATGTTTTTGCTGATTTGTGA 1329 0.4078 MGRGDIELETNKVYDHDDVADIEVPSTAHQISSDSWFQVGFILTTGINSAYVLGYSGTVMVPLGWTGGVVGLVLATIISLYANALIAHLHEYGGQRHIRYRDLAGFVYGKKVYSLTWALQYINLFMINTGYIILAGSALKATYVLFRDDGLLKLPYCIAIAGLVCAMFAICIPHLSALGIWLGFSTIFSLIYIIISFLLSLKDGLQSPPRDYNLPGDGFSKVFTIIGASANLVFAFNTGMLPEIQATIRQPVVKNMMNALYFQFTVGVLPLYLVTFTGYWAYGSSTSVYLLNSVNGPVWVKALANITAFLQSVIALHIFASPMYEFLDTKYGIKGSALNVKNMSFRIVVRGGYLAFNTFVSAFLPFLGDFMSLTGAISTFPLTFILANHMYLKAKKDKLTSSQKLWHWLNIGFFSIMSIAATIAAIRLISVDSKTYHVFADL* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1012 442 Pfam Transmembrane amino acid transporter protein 34 425 IPR013057 -
Vra3g1012 442 PANTHER PROLINE TRANSPORTER 1 9 437 - -
Vra3g1012 442 PANTHER OS05G0424000 PROTEIN-RELATED 9 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1012 Vra-Chr3 10178619 10184553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1012 60 442 Organic Solute Cotransporters AT3G55740 76.762 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1012 - - gmx:100778997 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1012 3 10178619 10184553 Vra6g0625 6 5709817 5712822 PCT