Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0622 ATGAAGGGTGGGAGCCGTTTCTTCACCATAGCTCTGGTCTCCGCCTGGTACGCCACCAACATTGGGGTTTTGCTACTCAACAAGTACCTTCTCAGTAACTATGGCTTCAGGTACCCTATATTCCTCACCATGTGCCACATGACCGCTTGCTCCCTCTTCAGCTACGTCGCCATCGCCTGGCTCAAGCTCGTTCCCATGCAGACCATACGCTCCCGCCTCCAGTTCCTTAAGATCGCCGCTCTCAGCCTCGTCTTCTGCGTCTCCGTCGTCTTCGGCAACGTCTCCCTCCGCTACCTCCCCGTCTCCTTCAACCAGGCCATCGGCGCCACCACTCCCTTTTTCACCGCCGTCTTCGCCTATCTCATCACCTTCAAGAGAGAGGCCTGGCTCACCTACCTCACCCTCGTCCCCGTCGTCGCCGGCGTCGTCATTGCCAGCGGGAGTGAACCGAGCTTCCATTTATTTGGATTCATAGTATGTGTTGCAGCTACAGCTGCTCGAGCTTTAAAATCCGTGTTGCAAGGAATTTTACTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTTCTTTACATGGCTCCAATTGCTGTTGTTTTCCTTCTCCCTGCCACACTAATGATGGAAGAAAATGTGGTTGGCATTACATTGGCTCTTGCCAGAGATGACGTGAAGATCATTTGGTATCTGCTATTTAATTCAGCACTTGCTTATCTTGTCAACCTGACCAATTTCTTGGTCACCAAACATACCAGTGCTCTTACCCTGCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTGATATTTAGAAACCCAGTGTCAGTCACTGGAATGATGGGTTATTCATTCACAGTCCTTGGAGTAGTACTCTATAGTGAAGCCAAAAAACGAAGCAAGTGA 921 0.4962 MKGGSRFFTIALVSAWYATNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLFSYVAIAWLKLVPMQTIRSRLQFLKIAALSLVFCVSVVFGNVSLRYLPVSFNQAIGATTPFFTAVFAYLITFKREAWLTYLTLVPVVAGVVIASGSEPSFHLFGFIVCVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLMMEENVVGITLALARDDVKIIWYLLFNSALAYLVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSFTVLGVVLYSEAKKRSK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0622 306 Pfam Triose-phosphate Transporter family 11 299 IPR004853 -
Vra6g0622 306 PANTHER - 4 305 - -
Vra6g0622 306 PANTHER SOLUTE CARRIER FAMILY 35 4 305 - -
Vra6g0622 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 300 - -
Vra6g0622 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0622 Vra-Chr6 5687863 5691695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0622 3 306 Organic Solute Cotransporters AT3G11320 90.132 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0622 - - gmx:100806704 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0622 6 5687863 5691695 Vra6g0622 6 5687863 5691695 ECH
Vra3g1014 3 10190652 10197122 Vra6g0622 6 5687863 5691695 PCT