Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0620 ATGTCTGCTTATGGCCATCAAATGGAGCAGATGTATTCTGCTCACAGTCTCTCTGGTGGTTCTGAGTTGAGGAGGAGCAGTTTTGTGCTGGAATCAGGATTCTACATCACATCCTTTGTTGCAACCATTCTTGTTGCTGCATTAGCCGCTGCCGGGCTTTTATTGATTACTTTATTGGTTTCACTGGCAATGATGCTGCAATCTTGTCAAAGTAGCCATGCTGGAATTATTGAGCTTCGGAATATAAACGACAAGTACAACTATTGCAAGGTCTATTCTCTGCATGCCAAGCTCAATAACTTGGAAGGACACAATTTTCCTAACCTCTGCAAGGACCTTGCCATAGGGTATATCAAGGGAGGTCAATATGCTAGAGACTTGGATTCAACCAAATCTCTAATGGATGATTATTTCAACTCTGTTAGACCATCAGATGATGATGATCTTGATGTGGTGTTGATAGACATAGATGGAATCGTTTCCCCAAATCCTCATTCTCCTACTTTGTTGCAAAGCAGCATTGACAATTGCATCATAGAGGCAAAGAATTTAAAGCACATGTTTGTTTTAAGATTATACTCCAAGCTTCAAGCTGGTGGATGGTCCATAATTTTGTTATCAAGAGAGCATGTAAAACACCAAAATGTCACCATCAATCATCTTCTCTCTGCTGGATTTAGAGGCTGGTCTTCTTTGATGATGAGAGATGATGCAGATTCTTCCAAAGGGAATGAGTTTTTTTCTAGACAAAGGAATGTGATAAAAACGAATGGATTCCGCATAAAAAGTATCATCAGCAGTGAAATGGATGCTTTGAGTGTTCATGATAGAGGAATAAGAGTTTTTTTGCTTCCGGACCCTATATTTGACAAGTTTGAACTGCAAACAAGAACATAG 897 0.3958 MSAYGHQMEQMYSAHSLSGGSELRRSSFVLESGFYITSFVATILVAALAAAGLLLITLLVSLAMMLQSCQSSHAGIIELRNINDKYNYCKVYSLHAKLNNLEGHNFPNLCKDLAIGYIKGGQYARDLDSTKSLMDDYFNSVRPSDDDDLDVVLIDIDGIVSPNPHSPTLLQSSIDNCIIEAKNLKHMFVLRLYSKLQAGGWSIILLSREHVKHQNVTINHLLSAGFRGWSSLMMRDDADSSKGNEFFSRQRNVIKTNGFRIKSIISSEMDALSVHDRGIRVFLLPDPIFDKFELQTRT* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0620 298 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 22 295 - -
Vra6g0620 298 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 22 295 - -
Vra6g0620 298 Gene3D - 84 293 IPR023214 -
Vra6g0620 298 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 182 290 IPR005519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0620 Vra-Chr6 5678444 5681272 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0620 - - gmx:100802632 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0620 6 5678444 5681272 Vra6g0620 6 5678444 5681272 ECH
Vra3g1020 3 10225444 10227811 Vra6g0620 6 5678444 5681272 PCT