Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1020 ATGTCTTCATATGCTCGTCAAATACAGCAGCAACACTCTGCACCTAGTCTCTCAGACGATTCCGAGACAAGAAGCCATTATGAGCTAGAGTCAGGATTCTTCATGAAATCGTTTACTGCAACAATCTTTGTTGCTTCACTTGTCACCCTTGGGGTTCTACTAGTTACGTTGGTCATTTCCTTGGTGATTATGCTGCAGTCCTGCCAAAGTAAAAGCGCTGGAGTAATCGAGCTTCTGAATATAAAGGACTATTACAGTTATTGCAGGTTGTATTCTCTGCATGCTGAGCTCAATAACTTAGAAGGATACAATCTTCCCACAACATGCAGAAACCTGGCTGTTCAATATATCAAAGGAGGTCAATATGCCAGAGAGTTGGATTTGGCTATGTCTGTGATTGACGATTACTTCAAGAATGTTAAACCTTTAGAGGATGGATTGGATGTGATTTTGATGGACATAGATTACATTTTCCCTTGGAATCACTCTTCCAATTTGTTTCACAGGTTTTATAATGACAGCACTAGCAACTGTATTAAAGAGGCAAACAATGTAAAGCTCATGTTTGTTTTAAGATTATACATGTACCTGCAAACTGGTGGATGGTCTATAATTTTGTTATCAAGAGAACCTAGAACATACCGAAACGTCACCATTAATCATCTTGTCTCTGCGGGATTTAGAAGCTGGTCTGCCTTGATAATGAGAGCAGAAGATTCAGATCCTACGAAAGGGTATGAGTACTTTTGTGGCAAAAGGAATGTGGTAAGGAAGAAAGGCTTCCGAATAAAAAGCATCATAAGCAGCCATATGGATGCCGTGACCGTTCGAGAGACTGGAGAGCGAAATTTTTTACTTCCAGACCCTCTGTGTGACAAGTTTATGAGAGAGCATAGATACTGA 903 0.402 MSSYARQIQQQHSAPSLSDDSETRSHYELESGFFMKSFTATIFVASLVTLGVLLVTLVISLVIMLQSCQSKSAGVIELLNIKDYYSYCRLYSLHAELNNLEGYNLPTTCRNLAVQYIKGGQYARELDLAMSVIDDYFKNVKPLEDGLDVILMDIDYIFPWNHSSNLFHRFYNDSTSNCIKEANNVKLMFVLRLYMYLQTGGWSIILLSREPRTYRNVTINHLVSAGFRSWSALIMRAEDSDPTKGYEYFCGKRNVVRKKGFRIKSIISSHMDAVTVRETGERNFLLPDPLCDKFMREHRY* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1020 300 Gene3D - 83 297 IPR023214 -
Vra3g1020 300 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 16 297 - -
Vra3g1020 300 MobiDBLite consensus disorder prediction 1 23 - -
Vra3g1020 300 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 85 290 IPR005519 -
Vra3g1020 300 MobiDBLite consensus disorder prediction 1 18 - -
Vra3g1020 300 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 16 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1020 Vra-Chr3 10225444 10227811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1020 - - pvu:PHAVU_001G240100g 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1020 3 10225444 10227811 Vra6g0620 6 5678444 5681272 PCT