Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0594 ATGAACAGCGACTCCTCCCGTCGTTCCCCCGCCACCGAATACGACGGTGTCGATGGCGACCCCGTGGTGTGGGCGGCGGTCGATGAGAGCCTCCGCGAGGTGCAGTCGATGTTGGACCGCAACCGCCGCCTGATCGAAGAGGTGAACGAGAATCAACAAACGAGGCTCCGCCACAACATGGTCAAGAACGTGTCCCTCATTCAGGAGCTCAACGGCAACATCTCCAAAGTCCTCTCTCTCTACTCCGATCTCAACTCCACTTTCTCCGCCGCTTTCCAGAACCACCACTCCGCCGCCAACGTCACCCCTGACAAATCGTGA 321 0.5919 MNSDSSRRSPATEYDGVDGDPVVWAAVDESLREVQSMLDRNRRLIEEVNENQQTRLRHNMVKNVSLIQELNGNISKVLSLYSDLNSTFSAAFQNHHSAANVTPDKS* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0594 106 Pfam Early Flowering 4 domain 20 98 IPR009741 -
Vra6g0594 106 PANTHER PROTEIN ELF4-LIKE 4 13 100 IPR040462 GO:0042753
Vra6g0594 106 Coils Coil 27 51 - -
Vra6g0594 106 PANTHER PROTEIN EARLY FLOWERING 4 13 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0594 Vra-Chr6 5355101 5355699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0594 - - ccaj:109790811 122.864
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0594 6 5355101 5355699 Vra6g0594 6 5355101 5355699 ECH
Vra3g1210 3 12859556 12860140 Vra6g0594 6 5355101 5355699 PCT